Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_4371 |
Symbol | |
ID | 5541884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 5624492 |
End bp | 5625568 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640896477 |
Product | transport system permease protein |
Protein accession | YP_001434413 |
Protein GI | 156744284 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCAG CATCGATGGT TTCGACATCT GCAACAATGC ACGCGCACAT CGGATGGCGG CGTGTCGGGT TGCTGCCTGC ACTGACCCTG CTGCTGCTGG CAACTGTGCT CCTTGGCGCG GGTATCGGCG CGGTCGCTGT GCCCCCCGAC GTTATCGGCG CCATGCTACT GAGGAAGATC GGCGTTGTGA TCGATGTTCC TGTCAGTACG CAGCAGGAGG CGATTTTCTG GACGATCCGC CTGCCGCGGG TGCTGCTCGG CACGCTGGTT GGCGCCGGGC TGGCAGTGAG CGGTGCGCTG CTTCAAGGGG TGTTTCGCAA CCCGCTGGCT GACCCTGGCT TGATCGGCGT CAGCAGCGGC GCGGCGCTTG GCGCCGTTGC AGTTATTGTC CTTGGTATCT CGTCGCTGGG GTTGATGACC CTGCCGCTGG CGGCGTTTCT CGCCGGTACA GCGACGACGT CCCTCGTCTA TCGACTGGCG CAGCGCCATG GTCGCACTGA TGTGGCAACC CTGCTCCTCG TCGGGCTGGC GCTCAATGCG CTGGCCGGAG CGACCACCGG ATTGTTGACC TATCTGGCGG ATGATGCGCA ATTGCGATCT ATTGTCTTCT GGACGATGGG CGGGTTAGGC GGCGCACTCT GGGAGACCCT GATTGTCGCG GCGCCGTGGA TCGGTCTGTC GCTGGTTCTG GCTCCGCGCT TGGGTCGAGC GCTCAACCTG TTTGCGCTTG GTGAGAGCGA GGCGCGCCAT CTTGGCATCG AAGTTGAGCA GGTCAAGCGC GGGGTCATTC TGTTAGCGGC GCTTGCCACT GGCACATCCG TGGCGCTTGC CGGTCCGATT GGCTTCATCG GATTGATCGT CCCGCACATC GTGCGCCTGA TTGCCGGACC GGACCATCGG CTCCTGTTGC CTGCCTGCGC GCTCGGTGGC GCCAACCTGC TCGTGCTGGC AGACCTGTTG GCGCGCACGA TGGCAGCGCC AGCCGAGATA CCGGTTGGGC TAATCACCGC ATTTGCAGGG GGACCGTTCT TCCTGGCGCT GATCCTGCGC GCCAGACGAC AGTATGGTTG GGGATGA
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Protein sequence | MSAASMVSTS ATMHAHIGWR RVGLLPALTL LLLATVLLGA GIGAVAVPPD VIGAMLLRKI GVVIDVPVST QQEAIFWTIR LPRVLLGTLV GAGLAVSGAL LQGVFRNPLA DPGLIGVSSG AALGAVAVIV LGISSLGLMT LPLAAFLAGT ATTSLVYRLA QRHGRTDVAT LLLVGLALNA LAGATTGLLT YLADDAQLRS IVFWTMGGLG GALWETLIVA APWIGLSLVL APRLGRALNL FALGESEARH LGIEVEQVKR GVILLAALAT GTSVALAGPI GFIGLIVPHI VRLIAGPDHR LLLPACALGG ANLLVLADLL ARTMAAPAEI PVGLITAFAG GPFFLALILR ARRQYGWG
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