Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0401 |
Symbol | |
ID | 5537863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 509396 |
End bp | 509869 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640892564 |
Product | hypothetical protein |
Protein accession | YP_001430551 |
Protein GI | 156740422 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02246] conserved hypothetical protein |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00235213 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00197507 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGTGCTTA AACAAGATTG GCGAAACTAC AGTTATAAAA CGAACTGTGA AAAGGACAGG AACCATAGTA CCGCCGAACA GCAAATCGAG CAGATTATCC ACCGCCAGCA GGACGCCTGG AATCGCGGCA ACGCGGCAGG TTATTCGCAG GACTGTGATG AGAACCTGTC GTTCACCAAC ATCGTCGGCG AAATGGCTTT CGGGCGGCAG GCATTTGAAG CCAAACATGC GTTTATTTTC TCTCACATTT TCAAGGGCAG CCGATTGGAG ATGGACGTTC GGCGCATTCA GTTCCCCGCG CCGAACGTTG CGCTGGTGGA TATTGTCTGC ACGCTGCGCG ACTACGTCGC CCTGCCGCCA GGCGTACCAC CCCGTCCGGA CGGTCTCTTG CGCACCTGCC TGCTGGAGGT GCTGATGCGC ACGGAGGCTG GCTGGCGGGT GGTTGCCTAT CACAATGTGG ATGTGAAGGT ATGA
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Protein sequence | MVLKQDWRNY SYKTNCEKDR NHSTAEQQIE QIIHRQQDAW NRGNAAGYSQ DCDENLSFTN IVGEMAFGRQ AFEAKHAFIF SHIFKGSRLE MDVRRIQFPA PNVALVDIVC TLRDYVALPP GVPPRPDGLL RTCLLEVLMR TEAGWRVVAY HNVDVKV
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