Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2482 |
Symbol | |
ID | 4022973 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 2772908 |
End bp | 2775094 |
Gene Length | 2187 bp |
Protein Length | 728 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637962675 |
Product | TonB-dependent receptor |
Protein accession | YP_569613 |
Protein GI | 91976954 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.318128 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGGA TGAAGGGTGT TACCATTCTG CTGTTGAGCG CTGCGACGGT CACGTCCGGT GCGGGGTACG CCGGCAACGA AGGCAAGGGG GCCTATGAGC TCGGAATGAT CCAAGTGACT GCGCCGGTGG ATGAAGGTTC CGAGTTCGGC GACTACGGCG GCAGCACGAT CTCCAACACG CAGACCGAGA CCTACAACAA GCCGACGCTC GACAAGGCGA TCGACCTCGT GCCCGGCGTC AATGCCGGCA ATACCGGCAG CCAGCGCAAC GAAACCAACA TCTACGTCCA CGGCTTCGAC CGTCTGCAGG TGCCGCTGTC GATCGACGGC GTCCGCATCT ACCTTCCGGC AGACAATCGC CTCGACTTCT CCCGCTTTCT GACCGACGAC ATCGCGCAGA TCCAGATCGC CAAGGGCTAC GCATCCGTGC TCGACGGGCC GGGCGCTCTG GGCGGGGCGA TCAATCTGGT CTCCAAGAAG CCGGTCAAGG CGCTGGAGGG CGAATGGCGC AGCCAGGCCG AATTCGGCAA CACCGGCGTG TTCGACGGAT TCAAGAATTA CGGCCGCGTC GGCAGCAAGC AGGACCAATA CTACTTCCAG GCCAGCGGCA CGTGGCGCAA GGTCGAGGGT TGGGAGCTGC CGTCGAGCTT CACGCCGACC GCGGTCGAGG ACGGCGGTCG GCGCAACTTC TCGGACTCCA ACGATTGGAG CGTCAACCTG AAGGCCGGCT GGACGCCAAA TCCGACCGAT GAGTACTCGA TCAATTTTAT CAAGCAGAAC GGCAAGAAGA ACGCGCCGTA CAATGTCGAA CCGACGGCGT CGCCGAGATA CTGGTCGTGG CCGTCTTGGA ATGTGCAGAT CTTGTCGGCG GCGACCAAGA CGGAGATCGG CGACGACGCC TACGTCAAGA CGCGGACGTT CTGGGAGACC TTCGATAACG CGATCGACAT GTGGGACAAC GCGGCGCAGA CGCAGCGATA CTCGACCAGC GCGGCGCGGT CGATCTATCA GGATTGGGCG GTCGGCAATA CGGTCGAGGT CGGCAAGGAA TTCGGCAGCT TCGACACCCT CAAGGTGGCC ACGCATGTGC GGCGTGACAG CCATTCCGAA TGGAACGAGC TGTTCACCGA CCGCTTCGGC CTGAATGCGA CCACGACGCC GAAAAGCTCC TCCTGCAACA CCAGCGTCAC CTCGAGCGCG GTCTGCTTCA ACGAGCCGAC CCAGACCTCC GTCGAAGACA CCTATTCGGT GGCGACGGAA AACACGGTGC ACATCACGCC GAGCTTCGAC TGGGTGCAGG GCGCCAGCTA TGACTGGCGG CATCTCAGCA AGGCCAACGA CTACGTGCTC GGACAGTACA GCAAGGGCGC CTATTACGAG CCGTCCTGGA TCAACTACAA GTTGTTCGAC GATTCGGCCT TCAACTGGCA GTCGGCGGCG ATCTGGCGTT ACTCGGACAC GGCGAAGCTG TTCATGAACA TCTCCGACCG CACCCGCTTT CCGACATTGT TCGAACGCTA CAGCTCGCGC TTCGGTACGG GCGCGTCGAA CCCCCAATTG CTTCCCGAAC GCGCGGTCAA TTATCAGCTT GGGTGGACCA ATGCCTTTGC TCCGAAAAGC CAGGTGTCGG TGCTCGTCTA TTACGCCGAC GTCAGGGACA TGATTCAGTC GGTCGCGACC GGCCGCACCT TCGTCGACCC GGTTTCCGGG AGGGCTTCCA CGATCACGCA GAACCAGAAT GTCGGCAATG GCTATCGCTA TGGCATCGAT TTCGCGGTCG ACTATGCGGT GAGCGCCACG CTCGTTCTGG GCGGAAACGC CTCCTACATC CACAACGTCC TGACCCACCC CACCGATCCG ACGATCCAGC AGACCGGGAT TCCGACCGTC AAGGGAATGC TCTATGCGAG CTACAGCCCG ATCGAATCGG TGACCCTGAC GCCGAACCTG TTGTTCGCCG ACGATCGCTG GTCGCAGAAG AACCAAGTGA TCGCCCAGAA GTCGGTTTCC AGCTACGTCA AGACCGGCTC CTATATGCTG GCCAATTTCG CGGCGGATTA CCGGATGCGG GAGAACCTCA CCTGGTCCGG CGGAGTGAGA AACATCTTCG ATCAGGAATA CTCGCTCGCC TGGGGCTATC CCGAAGCCGG GCGAACCTAC TACGTGTCGA TGAAGGCGAC ATTCTGA
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Protein sequence | MKRMKGVTIL LLSAATVTSG AGYAGNEGKG AYELGMIQVT APVDEGSEFG DYGGSTISNT QTETYNKPTL DKAIDLVPGV NAGNTGSQRN ETNIYVHGFD RLQVPLSIDG VRIYLPADNR LDFSRFLTDD IAQIQIAKGY ASVLDGPGAL GGAINLVSKK PVKALEGEWR SQAEFGNTGV FDGFKNYGRV GSKQDQYYFQ ASGTWRKVEG WELPSSFTPT AVEDGGRRNF SDSNDWSVNL KAGWTPNPTD EYSINFIKQN GKKNAPYNVE PTASPRYWSW PSWNVQILSA ATKTEIGDDA YVKTRTFWET FDNAIDMWDN AAQTQRYSTS AARSIYQDWA VGNTVEVGKE FGSFDTLKVA THVRRDSHSE WNELFTDRFG LNATTTPKSS SCNTSVTSSA VCFNEPTQTS VEDTYSVATE NTVHITPSFD WVQGASYDWR HLSKANDYVL GQYSKGAYYE PSWINYKLFD DSAFNWQSAA IWRYSDTAKL FMNISDRTRF PTLFERYSSR FGTGASNPQL LPERAVNYQL GWTNAFAPKS QVSVLVYYAD VRDMIQSVAT GRTFVDPVSG RASTITQNQN VGNGYRYGID FAVDYAVSAT LVLGGNASYI HNVLTHPTDP TIQQTGIPTV KGMLYASYSP IESVTLTPNL LFADDRWSQK NQVIAQKSVS SYVKTGSYML ANFAADYRMR ENLTWSGGVR NIFDQEYSLA WGYPEAGRTY YVSMKATF
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