Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_3834 |
Symbol | |
ID | 4571456 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008608 |
Strand | - |
Start bp | 8958 |
End bp | 10109 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639754020 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_899675 |
Protein GI | 118577436 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 160 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGT TACCCTTGCA AGGCCGCACC CTGGCGCTGC TTGCCGTCAT CATTCCTTTG CTGGTGCTTT TTATTTATGT CGGTCTGCGA TCAGGGCCGC TCGCCCCGGT CGCTGTGACG GTGGCAAGCG TGGAATCACG GGCTATCACA CCGGCGCTGT TCGGCATCGG CACGGTGGAG GCGCGCTACA CCTACAAGAT CGGGCCGACG TTTGCCGGGC GCGTCAAACG CCTGGAGGTG CATGTAGGCG ACCAGGTCAA GGCCGGACAG GTGCTCGGCG AGATGGATCC GGTCGACCTC GATGATCGGG TGCGCTCACA GGAGTCGGCA TTCAAGCGTG CGGAAGCGGC TTTGCGCGAG GCAGAAGCCC GGCAAGCCTA CGCGCAAACC CAGGCGCGCC GCTATGAGCA ATTGTTTGCG GTGCGCTCGA CCAGCGAGGA AATCGTCACC ACCAAGCGGC AGGAACTGCA GATCGCCGAT GCCGCCCTAT CCGCCGCTCG GGAAGATATT GCCCGGGCAC GCTCCGACCG CGAAGGACTC GTCGCGCAGC GGAGCAATCT GCGCCTGATC GCGCCGGTCG ACGGTGTAGT CGCCGTGCGC GATGCCGATC CCGGCACGAC CATCGTCGCA GGCCAGGCCG TGGTGGAAGT GATCGACCCC AAGAGTTTGT GGATCAATGT GCGCTTCGAC CAGATCAGCG CATCGGGGCT GGCTGGGGGG CTGCCGGCTC GTATCGTCCT GCGTTCGCGT GGCGGCCAGA CGTTGAATGG TCGCGTGCTG CGGGTGGAAC CCAAGGCCGA CGCGGTAACC GAGGAAACGC TCGCCAAGGT GACATTCGAT AACAAACCAG AACCTTTGCC ACCGGTGGGT GAACTGGGCG AAGTCACAGT TGACTTGCCG GCGCTCCCGG CCGCTCCACT GATCCCCAAC TCTGCCGTCC AGCGTGAGGG CGACAAAGTC GGGGTCTGGC AAATCGTGGA TGGTGATCTG CGTTTCTCCC CGGTCAAGCT CGGCACTTCC GACCTCAATG GTTACGTGCA GGTGCGCGAA GGGCTCAAGA ATGGGGACCA GGTTGTGACC TATAGCGAAA AGGCACTGAC GGCGCGCAGC CGCATCCATG TGGTCGACCA CATCCCAGGA GTGTCACGAT GA
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Protein sequence | MKKLPLQGRT LALLAVIIPL LVLFIYVGLR SGPLAPVAVT VASVESRAIT PALFGIGTVE ARYTYKIGPT FAGRVKRLEV HVGDQVKAGQ VLGEMDPVDL DDRVRSQESA FKRAEAALRE AEARQAYAQT QARRYEQLFA VRSTSEEIVT TKRQELQIAD AALSAAREDI ARARSDREGL VAQRSNLRLI APVDGVVAVR DADPGTTIVA GQAVVEVIDP KSLWINVRFD QISASGLAGG LPARIVLRSR GGQTLNGRVL RVEPKADAVT EETLAKVTFD NKPEPLPPVG ELGEVTVDLP ALPAAPLIPN SAVQREGDKV GVWQIVDGDL RFSPVKLGTS DLNGYVQVRE GLKNGDQVVT YSEKALTARS RIHVVDHIPG VSR
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