Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1493 |
Symbol | |
ID | 6463502 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 1572440 |
End bp | 1573789 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642727720 |
Product | signal recognition particle protein |
Protein accession | YP_002018360 |
Protein GI | 194336566 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0541] Signal recognition particle GTPase |
TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000265163 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCGATA GTTTAAGTGA TAAATTAGAG GCCACCTTTA AAAAACTTGC GGGTCAGGCC ACCATTAACG AGATTAACAT TGGTCTCGCC ATGCGCGATA TCAAGCGAGC TCTTCTTGGT GCTGACGTCA ATTACAAGGT TGCAAAGAAA TTAATTGATG ATATAAGAGA GAAATCTCTT GGCGAACAGG TCATCAAAAG CGTTTCCCCT GCGCAGATGA TCGTCAAAAT CGTTTATGAC GAGCTGACGG AGCTGATGGG TGGAGAGCAG AAGCCCTTGA ACCTTTCTCC AAAAAAACTG CCTGCGGTTA TCATGGTTGC CGGTTTGCAG GGTTCCGGGA AGACCACTTT CTGCGCCAAA CTGGCATTAC GTTTAAAAAA GAGCGGCAAA CAGCCGATGC TCGTTGCGGC TGATGTTTAT CGTCCTGCGG CAATTGATCA GCTTAAAGCA CTCGGTCAGC AGGTGGATGT CCCTGTTTTT GCCATTGAAG AGCAGGATGC CATGAAAGCA GCGCTTCAAG GATTGGAGGC CGCCCGCTCT GCTGCGAAAG ATGTTGTTAT TGTCGATACT GCTGGTCGTT TGCAGATTGA TCAAGTCATG ATGGCAGAGG CTGAGTCCTT GAAGCATGCA CTCAAACCTG ACGAGCTTCT CTTCGTTGTT GACTCCATGA TGGGCCAGGA AGCGGTCAAT ACGGCCAAGG CATTTAATGA TCGCCTTGAT TTTGACGGCG TAGTACTGAC CAAGCTTGAT GGCGACTCAA GGGGTGGTGC GGCGCTATCC ATCCGGCAGG TTGTTGAAAA GCCGATTAAA TTTATCAGCA TCGGAGAAAA GGTTGACGAC CTTGACCTCT TCTACCCCGA TCGTATGGCC CAGAGAATTT TGGGAATGGG TGATATCGTC AGTTTTGTTG AAAAAGCACA GGAAAACCTC GATCTTGAGA AGAGTCTTGA GATGCAGAAA AAGTTGATGA AGAACGAGTT TGATCTCAAC GACTTTTTCG ACCAATTGCA GCAGCTCAAG AAAATGGGAT CAATTCAGGG ATTGATTGAA ATGGTGCCAG GTCTGAACAA GATGGTTCCC AAACAGGATC TTGAAAATCT TGACTTCAAA CCAATTGAGG CCATGATCAA TTCCATGACA AAGCAGGAAA AGATGACTCC CGATATCATT AACGGCAGTC GTCGGCAACG TATTGCACGA GGCAGCGGAA CAAAGGTTCA GGAGGTCAAC CTTCTGTTGA AGCAATTCGG GGAGATGAAG AAGATGATGC GTTCGGTATC AAAGCTCTCT CAGTCCGGCA GAAAAATTAC TTCGCAGAAT CTTGCGCTTG ACAAGTTTTT AAAACGATAG
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Protein sequence | MFDSLSDKLE ATFKKLAGQA TINEINIGLA MRDIKRALLG ADVNYKVAKK LIDDIREKSL GEQVIKSVSP AQMIVKIVYD ELTELMGGEQ KPLNLSPKKL PAVIMVAGLQ GSGKTTFCAK LALRLKKSGK QPMLVAADVY RPAAIDQLKA LGQQVDVPVF AIEEQDAMKA ALQGLEAARS AAKDVVIVDT AGRLQIDQVM MAEAESLKHA LKPDELLFVV DSMMGQEAVN TAKAFNDRLD FDGVVLTKLD GDSRGGAALS IRQVVEKPIK FISIGEKVDD LDLFYPDRMA QRILGMGDIV SFVEKAQENL DLEKSLEMQK KLMKNEFDLN DFFDQLQQLK KMGSIQGLIE MVPGLNKMVP KQDLENLDFK PIEAMINSMT KQEKMTPDII NGSRRQRIAR GSGTKVQEVN LLLKQFGEMK KMMRSVSKLS QSGRKITSQN LALDKFLKR
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