Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0003 |
Symbol | |
ID | 6462811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 2883 |
End bp | 3992 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 642726307 |
Product | DNA replication and repair protein RecF |
Protein accession | YP_002016979 |
Protein GI | 194335185 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
TIGRFAM ID | [TIGR00611] recF protein |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0749386 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAATTAC AGTGTATACA TTACGAGAAT TTCAGAAACC ACCGGTTATT GAATTTTGAG CCAAGTTATG GTATATCAAT TCTTTATGGG CCTAACGCAT CAGGAAAGAC CTCTATACTG GAAGGGGTTC ACTATTGTGC ATTGACAAGA GGTTTTCATA ATGCACTTGA TAGTGAGTGT CTCTATTTTT CTTCTGATTT CTTTGTTCTT GAAAGCAGTT TTCTCGATGC TACAGAACGT GCAACAACCG TCAGAGTTCT TTATACAAAG GAAAAAGAAA AAAAAATTAT TGTTGATAAG AGCGAAATAA AGCCTTTTTC AAGACATATT GGAAGGATTC CTTGTATTAC CTTTTCACCG GCAGAACTGG TAATTGTTAA TGGTGCACCA GCAGAAAGAA GGCGTTTTCT TGATAATGCT ATTTGTCAGA CAAACCGAAG ATATCTTGAC GATCTGTTGG CCTATAAAAG GGTATTGCAA CAAAGAAATG CCCTGATTGG TCAGATGTAT GAAAAGACAG GATCACAGAA AGAGATGCTT GCAATTTGGA CAGATAGTCT TTCACGTCTT GCAGCCTCAA TTGTTTATAC AAGAATGCAG TTTTTATCTT CATTTTTGCC ACTTTTTCAA ACTCTCTATC AACTCTTATC GCCGGATGAG CATCCGACCA TAGTGTATCG CTGCTCACTC GGAAAAGTTT TTCATGATAG TTCAATTGAT CAATTGTACA GCCAATTTCT TGTAAAGTTT GAAGAGACAG AACGAGAGGA AATTTTACGT GGGCAGACCA TGACAGGCCC ACATCGTGAT GATTTACTTT TTTTACTCCA TACCAGGGAG ATTAAAAAAT ATGCTTCACA GGGCCAAATG CGCATCTTTC TTATAGCTCT CAAACTTTCA CAACATCGTT TATTTTCAGA TATCCTCGGC GAAAAACCAA TTTGCCTGCT TGATGATCTG TTCAGTGAAC TGGATGCGTC TCACTCAAAT GCCATTTTTC GTCTGCTTGA AACATGCGGT CAAACGATTA TTACATCTGC TGAAAATAAA CCATATAGTC ACGTTGATTC AATCTCTATC GAATCGTTGA AGGGTATAAA GGAGATGTAA
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Protein sequence | MKLQCIHYEN FRNHRLLNFE PSYGISILYG PNASGKTSIL EGVHYCALTR GFHNALDSEC LYFSSDFFVL ESSFLDATER ATTVRVLYTK EKEKKIIVDK SEIKPFSRHI GRIPCITFSP AELVIVNGAP AERRRFLDNA ICQTNRRYLD DLLAYKRVLQ QRNALIGQMY EKTGSQKEML AIWTDSLSRL AASIVYTRMQ FLSSFLPLFQ TLYQLLSPDE HPTIVYRCSL GKVFHDSSID QLYSQFLVKF EETEREEILR GQTMTGPHRD DLLFLLHTRE IKKYASQGQM RIFLIALKLS QHRLFSDILG EKPICLLDDL FSELDASHSN AIFRLLETCG QTIITSAENK PYSHVDSISI ESLKGIKEM
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