Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_4079 |
Symbol | |
ID | 8532512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 4489380 |
End bp | 4491569 |
Gene Length | 2190 bp |
Protein Length | 729 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_003261414 |
Protein GI | 261823308 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.502501 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGCCA GGAAGAACTT CACGCCGTCT ACCGGGAAAA CGCGTTTTCC TATTCCCTCT ACGTTGGCCG TCGCTGTCAC AGTGGCTGTG CTGAGCGGAG TCACGATACC CGTGCAGGCA GCAACGGCAG AACGCGATAA TTCCACTATC GTGGTTGAAG CCAAAGATGC TGAGGCTGCG CAGGGGTTGG TGGCGGGCGG CATGTCGGCG CGTGCGTCCA GCACCGGGCT ACTGGGTAAA AAGGACGTCA TGGATACGCC GTTTAACGTC AGTAACATGA CGTCGTCGTT TATTGAAAAC AAACAGGCGC AGACGCTGGG GCAGGTGGTG GCGCATGATG CCTCGGTGCG AGTCAGTAGT TCGCAGGGCG GTCTGCTGGA TTCCTACTAC ATTCGTGGTT TCCCGCTCAA CGAAGGCAAC CTGAGCGATA TCGCTATGAA CGGCGTGTAC GGCGTTGCGC CCAACTATCA GTTGATGACC GACTACATTG AACGGGTTGA AGTGCTAAAA GGGCCGTCGG CGCTGCTGTA TGGGCTGTCG CCTAACAGCA GTGTGGGCGG TGTGATTAAC GCTGTCACCA AACGCCCGAC CACCGTAGGC AATCTGACCC GCCTGACTAC CAGTTGGCAG TCTGATTCTC AGTTTACGCA ACATGCGGAT ATTTCCCGCG TTTATGCGTT GGACAATAAC AATCTGCTCG GCGTGCGTTT TAACGGGAAT TACGGCTACG GCGACACGGT GTGGGACGGC AGCGACAAAC GTACACAGGT CGGCTCGCTT GGGCTGGATT TCTCGTCAGA ACGCTTCCGC GCCACGTTGG ATCTCATCAC TCAGCATCTG AAAACCCGTG CGCCGTCTCG TCCTTATTCG TTTGCGGCGG GGGTGACCGT GCCTGACGCG CCGGATGGTA ATAACAATAT TTCTCAGCCG TGGGGGTTTT GGCATTCGAA AGATCAGTCG GTGCTGCTGC ATACCGAATA CGATCTGGCG GATAACATCA CCTGGTTTAC CGATTTGGGT GGTTCCAGCG CACACGTGAG CCGATTGTCG GAGCAGGTGC CGCAGGTCAC GAATAACAAT GGTGATATCC GTTCTGGCGT AGGGAATTAC CGCTTTACCA CCAGTCGTTA CAATTTCGCG ACCGGCGTTC GTGCGGATGT GGAAACAGGC TCGGTGACGC ATAAGCTGTC GGCACAGACC AGCTACTATC GCGATCGTCA GGCCAGCGCT AGTAGGGCAG GAACAGCGAT TGATTCAAAT ATTTATAATC CAGTTTATGT GCCAGCACAG GACATTGCCG CGCCGTCGAG CATATACAAA CGCTCCTCCA CTGCACTGTC GGGCATCGCG CTGGCGGATA CGCTCGGTTT CTGGAACGAC GTACTGCAAG TCACGGGCGG TTTACGTTAT CAGCAGATCA ACTCGGATAA TTTCTCTGCA CCGGATGGCG GGACGCGCTC TTCTTATGAC AAGAGCGCAA TCACCCCGAT GCTCGGGGTG ATTGTTAAAC CCTGGCAGCA CGTCTCGCTC TATGCCAACT ATATCGAAGG GCTGAGTAAA GGGGATGTGG CACCCATGAC GGCGAGTAAT GCCGGGCAGG TACTCACGCC GTATAAGAGC AAACAGTACG AAGCCGGGGT AAAAATGGAC GCGTTGGGGA CGATCTCCAC GCTGAGCGTC TTCCAGATCA CCAAGCCGAG CGGTGCGCTG GTTAACGGCA CGTTTGTTGA AGCCAACGAG CAGCGCAATC GGGGTATCGA GCTGGATGTG GTCGGTTCAC CGCTGGAGGA TCTGCGTCTG ACGGGCGGCG TGATGCTGTT GGATGCGGAG CTGACTAAAA GCGTGACGCC GGGTGCGCAG GGCAAACGTG CGCCGGGCAC GTCACGTTTT CAGGCGAATG CCGGAGTGGA GTATGACCTG CCGTTCCTGC GCGATCTAAC ATTGAACGCC AACGTTATCC ATAACGGGAA GCAGAACGTC AACACCATCA ATACCCAGTC TATCCCTTCC TGGACCACCG TCGATTTCGG TGCACGTTAC AAGACGCGCA TCTATAACGC ACCGACCACG TTCCGCGCAG ATGTCCTTAA TGCTTTTGAC CGCAATTACT GGTCTGGCGT GACGTCGTTC AGCACGGTAT CGCAGGGAAC GCCGCGGACG CTGATGCTCT CCGTAGCGGT TGATTTCTAA
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Protein sequence | MNARKNFTPS TGKTRFPIPS TLAVAVTVAV LSGVTIPVQA ATAERDNSTI VVEAKDAEAA QGLVAGGMSA RASSTGLLGK KDVMDTPFNV SNMTSSFIEN KQAQTLGQVV AHDASVRVSS SQGGLLDSYY IRGFPLNEGN LSDIAMNGVY GVAPNYQLMT DYIERVEVLK GPSALLYGLS PNSSVGGVIN AVTKRPTTVG NLTRLTTSWQ SDSQFTQHAD ISRVYALDNN NLLGVRFNGN YGYGDTVWDG SDKRTQVGSL GLDFSSERFR ATLDLITQHL KTRAPSRPYS FAAGVTVPDA PDGNNNISQP WGFWHSKDQS VLLHTEYDLA DNITWFTDLG GSSAHVSRLS EQVPQVTNNN GDIRSGVGNY RFTTSRYNFA TGVRADVETG SVTHKLSAQT SYYRDRQASA SRAGTAIDSN IYNPVYVPAQ DIAAPSSIYK RSSTALSGIA LADTLGFWND VLQVTGGLRY QQINSDNFSA PDGGTRSSYD KSAITPMLGV IVKPWQHVSL YANYIEGLSK GDVAPMTASN AGQVLTPYKS KQYEAGVKMD ALGTISTLSV FQITKPSGAL VNGTFVEANE QRNRGIELDV VGSPLEDLRL TGGVMLLDAE LTKSVTPGAQ GKRAPGTSRF QANAGVEYDL PFLRDLTLNA NVIHNGKQNV NTINTQSIPS WTTVDFGARY KTRIYNAPTT FRADVLNAFD RNYWSGVTSF STVSQGTPRT LMLSVAVDF
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