Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_2332 |
Symbol | |
ID | 6459402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | - |
Start bp | 2506763 |
End bp | 2508199 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642726298 |
Product | RNA methyltransferase, TrmA family |
Protein accession | YP_002016970 |
Protein GI | 194335110 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.45026 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATTAC GTGACATCTA CCGTAAGGGA GAGCTGGTCG AACTTACGAT TGCAGATATA GCAGAAAAAG ATCAGTGTTT CGGCACGCTC GACAACGGGG CAGGGGTGCT TGTCCGGGGA ATGCTGGCTG TGGGCGACAG GGTCTCGGCC AAGGTGCTCA AAGTCAAACC GCGCTATCTC GAGGCGGTGC TCGATGAGCT GCTGGAGCCA TCGGAAGACA GGGTCGAACC GGTATGCTCG GTCTTCGGCG TGTGTGGCGG ATGCAAATGG ATGCATGTCA GCTATGATGC CCAGCTGCAC TATAAGAAAA AGAAAGTTGC CGATGCGCTT GAGCACATCG GCGGCATGCA CGACATTGCC GTTCAACCGG TTCTTCCTGC ACCGGAGGCC TTTCACTATC GCAACAAGGT GGAGTTCTCA TGCTCCAGCA AGCGCTATCT GCTGCCTCAT GAGCTTTCCA TGGAGACATT GGACAAATCC AAAGACTTCG CATTGGGCTT TCATGCCCCG GGGAACTTCG AGAAAGTGCT CGAAATCGAC ACCTGTTATC TTGCCAAACC CAGTATGAAC GAAGCGCTTT CGGCGACAAG AGCGTTTGCG CTTGATCGGG GGCTTGAACC CTATGCAGCC CGCGCGCACA CAGGGTTTCT CCGTAACCTC ATGCTTCGTT ACAGTGAAGA GCATGACGAG CTGATGGTCA ATATTGTCAC CTCATGGTAT GACCGGGAGC TGATGGAGGC GTATCGGGAC CATCTGCTCG AACGCATGAA GGGCCGACGA ATGACCATTG TCAATAATGT CACCACACGC AAGAATACCG TCTCGACCGG AGAGAAAGAG TATGTCGTCT ACGGGGACGG GACTCTTCGC GAAAGGCTGG GCGACCTGCA CTTCCGGATC TCGGCAAACT CCTTTTTCCA GACCAATACC CGACAGGCCG AAGCGCTCTA CGAGGGAATT ATGCGCATGG CCGGGCTGAA GCAGGACGAT GTTGTCTATG ATCTCTACTG CGGTACCGGG ACGATCACGC TCTACCTTGC CGAACGATGC CGTCAGGCGG TAGGTCTCGA AGTGGTCGAG AGCTCGATCA TCGATGCTGC TGAAAATGCC GGGGCGAACG GGATTGAAAA CGCAGCGTTC TATCAGGTCG ATCTGAAGGA CTTTCACACC CTGGTCCCGA CCCTTGAGCA GTATGGCATG CCGAGAGTTA TTGTCACCGA TCCTCCGCGT GCGGGCATGC ATCCCAAAGC GCTTGAAACC CTGCTCCGCC TCCAGCCGGA GACCATTGTC TACGTCAGCT GCAACCCGGC CAACCTTGCG CGCGACGGTA AGGAGATCGT ACAGCAAGGT TACAGGCTTG AAGAGGTTCA GCCGGTCGAC ATGTTCCCGC ACACCAGCCA TGTGGAGACG CTGGCGTGCT TCCGACGAAC GGTGTGA
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Protein sequence | MTLRDIYRKG ELVELTIADI AEKDQCFGTL DNGAGVLVRG MLAVGDRVSA KVLKVKPRYL EAVLDELLEP SEDRVEPVCS VFGVCGGCKW MHVSYDAQLH YKKKKVADAL EHIGGMHDIA VQPVLPAPEA FHYRNKVEFS CSSKRYLLPH ELSMETLDKS KDFALGFHAP GNFEKVLEID TCYLAKPSMN EALSATRAFA LDRGLEPYAA RAHTGFLRNL MLRYSEEHDE LMVNIVTSWY DRELMEAYRD HLLERMKGRR MTIVNNVTTR KNTVSTGEKE YVVYGDGTLR ERLGDLHFRI SANSFFQTNT RQAEALYEGI MRMAGLKQDD VVYDLYCGTG TITLYLAERC RQAVGLEVVE SSIIDAAENA GANGIENAAF YQVDLKDFHT LVPTLEQYGM PRVIVTDPPR AGMHPKALET LLRLQPETIV YVSCNPANLA RDGKEIVQQG YRLEEVQPVD MFPHTSHVET LACFRRTV
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