Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_03994 |
Symbol | |
ID | 6304135 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 640691 |
End bp | 642922 |
Gene Length | 2232 bp |
Protein Length | 743 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642637917 |
Product | isocitrate dehydrogenase, NADP-dependent |
Protein accession | YP_001911802 |
Protein GI | 188574873 |
COG category | [C] Energy production and conversion |
COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTAATA CCCCCAAGAT CCTCTACACG CTCACCGACG AAGCACCTTA CCTGGCCACG CAGTCGCTGC TGCCGATCAT CGATGCCTAC ACCGACACCG CCGGCATCGT GGTCGAAACG CGCGATATCT CGCTGGCCGG GCGCATCCTG GCGCTGTTTC CCGAGTATTT GAGCGACACG CAAAAGGTTG CCGACGATCT GGGCGAACTC GGTGAGCTGG CTACCACGCC GGAAGCCAAC ATCATCAAGC TGCCCAACAT CAGCGCCTCG GTGCCGCAGC TCAAGGCTGC GATCAAGGAG CTGCAGGGCC AGGGCTATGC GCTGCCGGCG TATCCGGACG AGCCCAAGGA CGCAGCCGAA AAAGACATCA AGGCACGCTA CGACAAGGTC AAGGGCAGTG CGGTGAATCC AGTGCTGCGC GAAGGCAATT CCGATCGTCG CGCACCGCTG TCGGTGAAGA ACTATGCGCG CAAGCACCCG CACCGCATGG GCAAGTGGAG CAGCGATTCC AAGTCGCACG TGTCGCACAT GGAGTCTGGC GATTTCTTCG GTAGCGAGCA GTCCACCACG CTGGCCGACG CCGGCACGCT CAAGATCGAA TTCGTCGGTG CCGACGGCAG CAGCACCGTG CTGAAGGACA AGGTCGCGGT CAAAGCCGGT GAAATCGTCG ATGCCGCGGT GTTGAGCAAG CGCGCGCTGG CCAGCTTCAT CGACGCGCAG ATTGCCGATG CCAAGGCCCG CGACGTGCTG TTCTCGGTGC ATCTGAAAGC CACCATGATG AAGGTCTCCG ATCCGGTGCT GTTCGGTGTG GTGGTCGGCG AGTTCTATAA GGACACGCTG AGCAGGCATG CCGATGCGCT CAAGTCTGTC GGCTTCGATC CCAACAACGG CATCGGCGAT TTGTACGCAC GCATCGGCAC GTTGCCGGAA GACCAGCAGG CACGGATCAA GGCCGATATC CAGGCCGAAT ACGCGCAGCG CCCTGGGCTG GCGATGGTCA ATTCGGACAA GGGCATCACC AATCTGCATG TGCCCAGCGA CGTGATCGTC GATGCATCCA TGCCGGCGAT GATTCGCGAC TCCGGCCAGA TGTGGAACGC GCAAGGCACG TTGCAGGATA CCAAGGCGGT GATTCCGGAC CGTTGCTACG CCGACGTGTA TCAGGCAGTG ATCGACGACT GCAAGGCGCA CGGCGCGTTC GATCCGTCCA CAATGGGCTC GGTGCCCAAT GTGGGCTTGA TGGCGCAGAA GGCCGAAGAA TACGGCTCAC ACGACAAGAC CTTTCAGATG GCCGCTGCCG GCACCGTCAA GGTCACCGAT GGCAATGGCA AGACGGTGTT CAAGCATGCC GTGGAAGCCG GCGATCTGTG GCGCATGTGT CAGGTCAAGG ACGCGCCGAT CCAGGACTGG GTCAAGCTTG CCGTCGAGCG CGCACGTCTG AGCGACACCC CGGCCGTGTT CTGGCTGGAC CAGGCACGCG CGCACGATGC GCAGGTCATT GCCAAGGTCG AACAGTATCT GAAGGATCAC GACACCAATG GCCTGGATAT CCGCATCCTG CCGCCGGTGG AAGCGACGGC CTTCTCGCTG GAGCGCATCC GCAAGGGCCA GGACACCATC TCGGTTACCG GCAATGTGCT GCGCGATTAC CTCACCGACC TGTTCCCGAT CATGGAGCTG GGCACCAGCG CCAAGATGCT TTCCATCGTG CCGCTGATGG CAGGTGGCGG TCTGTTCGAA ACCGGTGCCG GTGGTTCGGC GCCCAAACAT GTGCAGCAGT TCGTCGAAGA AAACTGCCTG CGCTGGGATT CGCTGGGGGA ATTCCTGGCC CTGGCTGCCT CGCTGGAGCA CCTGGGCAAC CGTTACGACA ATCCGTCGGC CACGGTGCTG GCCAAGGCGC TGGATGTCGC CAACGGCCAG TTCCTGGACA ACAACAAGTC GCCGGCGCGC AAGGTCGGCG AGCTCGACAA CCGCGGCAGT CATTTCTATC TGGCGATGTA CTGGGCGCAA GCCCTGGCCG CGCAGACCGA AGACACTGCG CTGCAGGGCA GGTTCGCGCC GCTGGCCAGG GCCCTGACCG AGAACGAAGC CACCATCGTG GCCGAGCTCA ACGGCGCACA GGGCAAGCCG GTGGACATCG GTGGTTACTA CCATCCCGAT CTGGCCAAGG TCAGCGAAGC GATGCGTCCA AGCAAGACCT TCAACGATAT CCTGGCCACG TTGAAAGCCT GA
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Protein sequence | MPNTPKILYT LTDEAPYLAT QSLLPIIDAY TDTAGIVVET RDISLAGRIL ALFPEYLSDT QKVADDLGEL GELATTPEAN IIKLPNISAS VPQLKAAIKE LQGQGYALPA YPDEPKDAAE KDIKARYDKV KGSAVNPVLR EGNSDRRAPL SVKNYARKHP HRMGKWSSDS KSHVSHMESG DFFGSEQSTT LADAGTLKIE FVGADGSSTV LKDKVAVKAG EIVDAAVLSK RALASFIDAQ IADAKARDVL FSVHLKATMM KVSDPVLFGV VVGEFYKDTL SRHADALKSV GFDPNNGIGD LYARIGTLPE DQQARIKADI QAEYAQRPGL AMVNSDKGIT NLHVPSDVIV DASMPAMIRD SGQMWNAQGT LQDTKAVIPD RCYADVYQAV IDDCKAHGAF DPSTMGSVPN VGLMAQKAEE YGSHDKTFQM AAAGTVKVTD GNGKTVFKHA VEAGDLWRMC QVKDAPIQDW VKLAVERARL SDTPAVFWLD QARAHDAQVI AKVEQYLKDH DTNGLDIRIL PPVEATAFSL ERIRKGQDTI SVTGNVLRDY LTDLFPIMEL GTSAKMLSIV PLMAGGGLFE TGAGGSAPKH VQQFVEENCL RWDSLGEFLA LAASLEHLGN RYDNPSATVL AKALDVANGQ FLDNNKSPAR KVGELDNRGS HFYLAMYWAQ ALAAQTEDTA LQGRFAPLAR ALTENEATIV AELNGAQGKP VDIGGYYHPD LAKVSEAMRP SKTFNDILAT LKA
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