Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_4205 |
Symbol | |
ID | 8135203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 4750181 |
End bp | 4751788 |
Gene Length | 1608 bp |
Protein Length | 535 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644867522 |
Product | EAL domain protein |
Protein accession | YP_003019755 |
Protein GI | 253690565 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4943] Predicted signal transduction protein containing sensor and EAL domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCCCA GACTTAACAA ACATAAAATC AACCTCTTGC AGCTACTGGT TGCTGGCATA CTGCCGCTGC TGCTTGGGTT GTTGTTCACT TTTGTTGAGT CCAGATTAAT GGTAAAGCGG GATTTGGAAT CCACTGCGCA AATCGCGATG AATCATGCCG AGAATATTTC GGCACAGGCA TGGAAGATGG TAGATCGTCT CCAGCGCTTC CATGGTCAGC CCTGCAACAT TATCGGCGAT GAATTGCAGC GCCTCGGTTC GGTCTTTTCT TACTTTCGTG CCATTGGCGT TATCCATAAT ACCAATGTCT ATTGCTCTTC AACGTTTGGC AGCACACTGA CGCCAATCAG CCGCGTCATT CAACAACCGC TGCCAGAGAC GTATTCTGAA CGCTGGAGCC TGTCGATTGC TGGTTCAGAC AACGTGAAAG AACGGCCGGC GCTGATTTTC GTCCAGATGC CTCTTACGGG TGACGGCGCT TATGCCATGG TCGATGCGCA ATATCTGATC GACCTCATGA TTGCGATTAG CAAAATACGC GGCTACCAAC TTACCCTGAA AATGGATAAC GGCCATCCGA TTCAAACTGG CCCGGCGATT ACGCCCCGCA TCGGCCTATT TTCTACCTCT GCGCTTGAAA TCAGGTCGAG CCGATTCCCG ATTACGCTCA ATATCACCGC CCCAGCTTCT CAGGAAATAG CGAACTGGAA GCAGGCTTTC TTCACGTTTC TGCCACTGGC GATTATTCTC TCTCTGCTTT TCACTACAGC GATCTGGTAC TGGCAAAAAC GTAAATTATT ATTCCGCGAC GAAATCCGCA AAGGCATCGC TAACGGCGAG TTTTCCGTCT ATTACCAGCC CATCTATGAT GCAGAATCGC AAACCTGCAC CGGCGTTGAG ACGTTACTGC GCTGGCGACG TAGCAACGGG AAGTGGATCA GACCTGATAT ATTTATCTCT GCCGCCGAAG CTGAAAGTAT GATTATTCCC ATCACTCGGC ACTTATTTGA TCTGGTGGCA TCAGATATTG CCAGTTGGCA GGTAAAGCCG GGGTTTCATC TGGGGCTCAA CGTTGCAGCC GAACACTTGC ATCATCCCAG TTTTGTATCA GACGTACACC GCTTCGCAGA GAAGGTCGCT TCTCATTCAT TGAGCATTTC TCTGGAACTG ACGGAACGTA ACCTCATCAG CAACGGTCCT GAAATCATAC AGCGCCTGCA TCAGCTACGT GAAGATGGCT TTATGATTAC CATTGATGAC TTTGGTACCG GACACTGTTC ACTCTCTTAT CTGCAAAACT TTCCGCTAGA TTGCCTGAAA ATAGACCAGG GATTCGTTAG CGCAATTTCA TCACCAGATG AAGAAGCGCC AATTCTTGAT GCCATTATTA ATTTGAGCCA TCGCATCAAT CTTCAATCCG TCGCGGAAGG CGTAGAAACC AAACAGCAGC TCATGTATTT ACAACAGCAC GGCGTCAAAT ATATACAGGG ATTCCTTTAC GCTAAGCCGA TGGATAATGA ATCGTTTCTC GTCTGGCTTC ACTACAATGG CAATAAATCG ATAGAGAGCT TTATGATGAA AAATGAAGAA GGGAAGAAGA ACGACTAA
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Protein sequence | MSPRLNKHKI NLLQLLVAGI LPLLLGLLFT FVESRLMVKR DLESTAQIAM NHAENISAQA WKMVDRLQRF HGQPCNIIGD ELQRLGSVFS YFRAIGVIHN TNVYCSSTFG STLTPISRVI QQPLPETYSE RWSLSIAGSD NVKERPALIF VQMPLTGDGA YAMVDAQYLI DLMIAISKIR GYQLTLKMDN GHPIQTGPAI TPRIGLFSTS ALEIRSSRFP ITLNITAPAS QEIANWKQAF FTFLPLAIIL SLLFTTAIWY WQKRKLLFRD EIRKGIANGE FSVYYQPIYD AESQTCTGVE TLLRWRRSNG KWIRPDIFIS AAEAESMIIP ITRHLFDLVA SDIASWQVKP GFHLGLNVAA EHLHHPSFVS DVHRFAEKVA SHSLSISLEL TERNLISNGP EIIQRLHQLR EDGFMITIDD FGTGHCSLSY LQNFPLDCLK IDQGFVSAIS SPDEEAPILD AIINLSHRIN LQSVAEGVET KQQLMYLQQH GVKYIQGFLY AKPMDNESFL VWLHYNGNKS IESFMMKNEE GKKND
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