Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_45893 |
Symbol | |
ID | 5002247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009360 |
Strand | + |
Start bp | 100550 |
End bp | 102303 |
Gene Length | 1754 bp |
Protein Length | 565 aa |
Translation table | |
GC content | 60% |
IMG OID | 640417668 |
Product | predicted protein |
Protein accession | XP_001418158 |
Protein GI | 145347406 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | CGCGCGCGCG ATCGCGCCAT GACGACGGCG AACGAGCTCA AGGATGTCGG CAACGGGCAT TTCAAAAACG GCGCGTACGA CGACGCCGTC GCGGCGTTCA CGCGCGCGAT CGAGCTCGAC GCGACGAATC ACGTGCTGCA CAGCAATCGA AGCGCGGCGC ACGCGGGCGC GGAGCGATGG AGCGACGCGC TGCGAGACGC GGAGCGCACG ATCGAGCTGA AATCTGATTG GGGGAAGGGA TACGGACGAA AGGGCGCGGC GCTGTTCGGC GCGGGCGATC TGGAGGGGGC GCGAGAGGCG TACGCGGCGG GGCTGGCGCT GGAGCCGGAA AACGCGATGC TGCGGAGCGG ATTGGAGGAC GTGGAGTTCG CGATGAAGCG AAAGGGAGAG AGCGACGCGG GGATGAATCA AATCGGAGAC ATGTTCCGCG CGCCGGATCT CATGGCGAAG TTGGCGATGA ATCCGGCGAC GCGGGAATAC GTGAGTCAAC CGGATTTCTT GGCGATGATG GAGGAGGTGA AAAGAAACCC GTCGGCGCTT AATAATCACC TGAGAGATCC GAGAATGATG AACGTGTTGA GCGTGGCGAT GGGCGTGAAG GTGATGAGCG GCGACGACGC GGCGAAGGAG TTCGGGGAGC ACGAGGCAGA TTCGAAAAAG ACGGAACCCG CGCCGAAGGC GCCGGTCGAG GAACCGGCGA AAGCGCCCGA ACCCGAGGTC TCCGAGACTC GTAAGCAAGC GTTGGAGGCC AAGGAGGCGG GCAACGCTGC GTATAAGAAG CGTGATTTTG ACACCGCTAT CGCGAATTAC GACAAGGCGA TAGAGTTAGA TCCCGAGGAC GTATCGTTTC TGAACAATCG CGCGGCGGCC AACTTGGAGA AGGGCGATTT GGACGCGTGC ATCGCCGATT GCGAATCCGC CATCGAGAAA GGACGATCGA TTCGTGCCGA CTACACCATC ATCGCCAAGG CGATGACTCG CAAGGGGAAC GCGCTCGTGA AGCAGGGCAA GCTTGAGGCG GCGATTGACA CGTACCAGCG CTCGCTCACC GAGCACCGCA CCGCGGATAC TCTCAAGCGA TTGAATGACA CGGAAAAGGC GCTCAAAGAC GCCGCGACCG CGGCGTATTT GGATCCAGTG AAGGGAGAGG AAGCGCGCGA GCGTGGTAAC GCCTTTTTCA AGGATCAAAA GTTCCCCGAG GCGGTGAAGG AGTACAGCGA AGCCATCGCT CGGAACCCGA ACGATCACAA GGCGTACTCC AATCGCTCCG CCTCGTACAC CAAGCTCGCC GCGTTCAACG AAGCGTTGAA AGATGCGGAG AAGTGCATCG AACTCGAGCC CACCTTCGCG AAGGGTTACA CGCGCAAAGG GCACGTGCAG TTTTTCACCA AGAGCTACGA CGACGCCGTG GAGACGTACA CCGAAGGCTT GAAGCACGAC CCGAACAACG AAGAACTCAA GGATGGTTTG CGACGGTGCC ACGAGCAAAT CAACCGCGGC GCGATGGGAC AGCTCAGCGA AGAAGAGATG AAGGCTCGTC AAGAACGCGC GATGGCGAAC CCGGAGATTC AAGGCATCCT GAGCGACCCC GTGATGCGCC AAGTCTTACA AGACATGTCC ACCGATCCCA AGGCGGCGGC CGAGCACCAG AAAAACCCCA TAATCATGGC CAAGGTGCAA AAGCTCATCA ACGCCGGCAT CGTGCAGGTT CGATAGCGCG CTAAATTGAA TACATCATCA TCACAAACAT TTTT
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Protein sequence | MTTANELKDV GNGHFKNGAY DDAVAAFTRA IELDATNHVL HSNRSAAHAG AERWSDALRD AERTIELKSD WGKGYGRKGA ALFGAGDLEG AREAYAAGLA LEPENAMLRS GLEDVEFAMK RKGESDAGMN QIGDMFRAPD LMAKLAMNPA TREYVSQPDF LAMMEEVKRN PSALNNHLRD PRMMNVLSVA MGVKVMSGDD AAKEFGEHEA DSKKTEPAPK APVEEPAKAP EPEVSETRKQ ALEAKEAGNA AYKKRDFDTA IANYDKAIEL DPEDVSFLNN RAAANLEKGD LDACIADCES AIEKGRSIRA DYTIIAKAMT RKGNALVKQG KLEAAIDTYQ RSLTEHRTAD TLKRLNDTEK ALKDAATAAY LDPVKGEEAR ERGNAFFKDQ KFPEAVKEYS EAIARNPNDH KAYSNRSASY TKLAAFNEAL KDAEKCIELE PTFAKGYTRK GHVQFFTKSY DDAVETYTEG LKHDPNNEEL KDGLRRCHEQ INRGAMGQLS EEEMKARQER AMANPEIQGI LSDPVMRQVL QDMSTDPKAA AEHQKNPIIM AKVQKLINAG IVQVR
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