Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_0088 |
Symbol | |
ID | 4600061 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 99617 |
End bp | 100543 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639774699 |
Product | L-proline dehydrogenase |
Protein accession | YP_921321 |
Protein GI | 119714356 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0506] Proline dehydrogenase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCTCAGCC CCGCCCTGCT CCGTGCCTCC CGCAGCCCCC GTGCTCGCCG GCTCGTCGAG GGACTCCCCG CGACCCGTCG GGTGGTCGAC CGGTTCGTCG CCGGGGAGGA GAACGCCGAC GCCGTACGGG CCACGCTGGA GCTCGCCCGT GCGAACCGCG ACGTGTCCAT CGACGTGCTG GGCGAGGACG TGCACGACGA GGGGGGCGCC CGGCGCACCC GGGACGCCTA CCTGGCCCTG GTCGGCGCCA TGGCCGACGC CGGGGTCGCG CCCGGCGCCG ACCTGTCCCT CAAGCTGTCG GCCCTGGGGC GGGCGCTGCC GCGCGACGGC GACGCGATCG CCCTTGCGAA CGCCCACCGG ATCTGCGCCG CCGCGGACCA GCGCGGATTC ACGGTCACCC TCGACATGGA GGACCACACC ACGGTCGATG CCACGCTGGC GGTGGGTGCC GAGCTGCGCT CCGACTTCGA GCTCGTGGGC AACGTGCTCC AGTCGAACCT GCGGAGAACC GCCGGCGACA TCGAGCAGCT GCGCGCGTCG CCGGCGCGGG TGCGCATCGT CAAGGGGGCC TACCGGGAGC CCGCGTCGGT GGCCTTCCAG CGCAAGGCCG AGGTCGACGT CGCATACGCG CGGGACATCT CCGCCCTCTT CGGCTCCGCT TGCTACCCGA TGGTGGCCAC CCATGACCCG GTGATGCTGG CGCACGCCGT CTTCGAGGCC CGCCGTTCGG GGCGGGACGA CGACGGCTGG GAGACGCAGA TGCTCTACGG CATCCGCGCC GATCTGCAGG CCGAGATCGC GAGCTCTGGG CGCCGGATGC GGGTGTACGT CCCCGTCGGC ACCGACTGGT ACGGCTACTT CATGCGCCGG CTCGCCGAAC GGCCGGCGAA CGTCGCGTTC TTCCTCCGTG CGGTCGCCGG CCGGTGA
|
Protein sequence | MLSPALLRAS RSPRARRLVE GLPATRRVVD RFVAGEENAD AVRATLELAR ANRDVSIDVL GEDVHDEGGA RRTRDAYLAL VGAMADAGVA PGADLSLKLS ALGRALPRDG DAIALANAHR ICAAADQRGF TVTLDMEDHT TVDATLAVGA ELRSDFELVG NVLQSNLRRT AGDIEQLRAS PARVRIVKGA YREPASVAFQ RKAEVDVAYA RDISALFGSA CYPMVATHDP VMLAHAVFEA RRSGRDDDGW ETQMLYGIRA DLQAEIASSG RRMRVYVPVG TDWYGYFMRR LAERPANVAF FLRAVAGR
|
| |