Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmul_A2542 |
Symbol | |
ID | 3784047 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosospira multiformis ATCC 25196 |
Kingdom | Bacteria |
Replicon accession | NC_007614 |
Strand | + |
Start bp | 2911328 |
End bp | 2912161 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637812633 |
Product | diaminopimelate epimerase |
Protein accession | YP_413223 |
Protein GI | 82703657 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0253] Diaminopimelate epimerase |
TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0836815 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCTCA AGTTCACCAA AATGCATGGC CTCGGCAACG ATTTCATTGT CATTGATGCC GTGAATCAGC AGATTTCCCT CTCACCCGAA CAATTGCGGC GCCTTGCCGA CCGCCACCTG GGAGTAGGCT GCGACCAGAT TCTGCTGATC GAAAAGGCGG AAGGGGATGC TGATTTCCGT TATCGCATTT TTAATGCCGA CGGAGGAGAA GTGGAACAAT GCGGCAATGG GGCGCGCTGC TTCGTTCGCT ACGTCCATGA TCATGGTATG ACGGACAAGC AGCAGGTAAG GATTGAAACG CTAAGCGGGG TGGTTATTCC GGAGCTTGAA GCGGACGGGG AAGTAACGGT CAACATGGGT GTGCCGAAAT TCGATCCCGT CGAAATTCCT TTTATCGCCG AACAGCGAGC GCCTACTTAC TCCCTCTCCC TGGATGACAG GCAGGTGGAA ATCAGCAGTG TATCGATGGG CAATCCCCAC GCGGTCCAGG TAGTATCGGA TCTGGATAAC GCGCCGGTTT TGACGGAGGG GCCAGTTATC GAAAAGCATT CTCGTTTTCC TCAGCGAGTA AATGCCGGAT ATATGCAAGT CGTCGATCCT CATCATATCC GGCTGAGAGT CTACGAGCGG GGCGCGGGTG AAACCCTGGC TTGCGGCACC GGTGCCTGTG CGGCGGCGGT TGCGGGAATT CAGCGAGGGC TGCTCGAATC GCCCGTCAGG GTGAGCTTTT CCACTGGAGA CCTGTTCATA CGATGGGAAG GGGAAAATCA GCCGGTGTGG ATGACCGGTC CTGCCGTCGC CGTTTTTGAT GGAGAAATCG AGTTGCAGTT TTAA
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Protein sequence | MKLKFTKMHG LGNDFIVIDA VNQQISLSPE QLRRLADRHL GVGCDQILLI EKAEGDADFR YRIFNADGGE VEQCGNGARC FVRYVHDHGM TDKQQVRIET LSGVVIPELE ADGEVTVNMG VPKFDPVEIP FIAEQRAPTY SLSLDDRQVE ISSVSMGNPH AVQVVSDLDN APVLTEGPVI EKHSRFPQRV NAGYMQVVDP HHIRLRVYER GAGETLACGT GACAAAVAGI QRGLLESPVR VSFSTGDLFI RWEGENQPVW MTGPAVAVFD GEIELQF
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