Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_4072 |
Symbol | |
ID | 4025609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007959 |
Strand | + |
Start bp | 33953 |
End bp | 35374 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637964652 |
Product | cytochrome bd ubiquinol oxidase, subunit I |
Protein accession | YP_571560 |
Protein GI | 92109272 |
COG category | [C] Energy production and conversion |
COG ID | [COG1271] Cytochrome bd-type quinol oxidase, subunit 1 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.508302 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAGAGA TGCTGCCGAG CGCTCTCGAT CTTGCCCGGT TCCAGTTTGC CTTCACGATC GTCTGGCACT TCCTGTTTCC GGCCTTCACC ATCGGCCTGG CGAGCTATCT CGCCGTACTC GAAGCGCTGT GGCTTTGGAC GGGCCAACCG GTCTACTTCG ACACCTTTCA GTACTGGCTG AAGGCGCTTG CCGTCGCTTT CGCCATGGGC GTCGTTTCAG GCATCGTCCT GTCGTACCAG ATCGGCACCA ATTGGTCGGT TTTCGCCGAC CGGACGGGGG CCGTGCTCGG GCCGCTCTTT GCCTACGAAG TGCTGGCCGC CTTCTTCCTG GAGTCCGGCT TCCTGGGCAT CATGCTGTTC GGCCTGAAGC GGGTCGGACG CGGGCTGCAT TTCCTCGCGA CCTGCCTTGT GGCGGTCGGG ACGGCCATGT CGGCATTCTG GATTCTGTCT GCCAATTCCT GGATGCAGAC CCCGGCCGGC TATTCGATTG CGCCGGACGG CCGCTTCATG CCGGAAAGCT GGTTCGCGAT CGTCTTCAAT CCGTCGTTCC CCTTTCGCTT CGCCCACACT GTGACCGCGG CGTATCTCAC CACCGCGTTG ATCGTCGGCG CCGTCGGAGC CTGGCACCTG CTCCGCGACT CCCACAATGC AAACGCGCGG CTGATGTTTT CCATGGCGAT GTGGATAGCG GCGCTTCTGG CGCCGCTCCA GCTCGTTATC GGCGACCTGC ACGGCGTGAA CACCTACCAG CACCAACCGG CGAAGGTGGC GGCAATGGAG GGGCATTTCG AGACAGAGCG CGGCGCCGCC GCCGTGTTGT TCGGCTGGCC GGACGCGGCG GTCGGCACGA CCCGTTACGC GGTGCAGGTT CCGCACCTCG CCAGTCTCTA TTTGACCCAC GATTGGGACG GTGAGGTAGC GGGCCTCAAC GCGTTTCCGC GCGACACCTG GGCGACGAAC CTGCCGCTGG TGTTCTGGGC CTTCCGCGTC ATGGTGGGGC TTGGCGTGCT AATGATTGTT CTTGGCTTGG CTTCGGCTTG GGTGAGGTGG AAGGGCAGGC TCTACCAGGC GCGCTGGCTG CACCGCTTCG CGGTGGCCAT GGGCCCGGCC GGCCTGATCG CCGTGACGGC GGGGTGGATC GTCACCGAGG CGGGGCGGCA GCCCTTCGCG GTCTACGGAC TTCTGCGCAC GGCCGACAGT GTTGCACCAA TCGAGGCGCC GGCCATCGCA ACCTCGCTGG CGGCTTTCGC GCTGGTTTAT TTTGCCATGT TCGGTGCCGG CATCTGGCTG CTGTTCCAGC TTTTCGCCAA AACTCCACAA GCACATGAGG AGGGGCCGCC GGTAGACAAA CCAATCCGAT CTGCCGGCTT CACGGCCCGC CCGGCGCTGG CAGGCGGCGC CCGGCACCCG CCCGCGGAGT AG
|
Protein sequence | MEEMLPSALD LARFQFAFTI VWHFLFPAFT IGLASYLAVL EALWLWTGQP VYFDTFQYWL KALAVAFAMG VVSGIVLSYQ IGTNWSVFAD RTGAVLGPLF AYEVLAAFFL ESGFLGIMLF GLKRVGRGLH FLATCLVAVG TAMSAFWILS ANSWMQTPAG YSIAPDGRFM PESWFAIVFN PSFPFRFAHT VTAAYLTTAL IVGAVGAWHL LRDSHNANAR LMFSMAMWIA ALLAPLQLVI GDLHGVNTYQ HQPAKVAAME GHFETERGAA AVLFGWPDAA VGTTRYAVQV PHLASLYLTH DWDGEVAGLN AFPRDTWATN LPLVFWAFRV MVGLGVLMIV LGLASAWVRW KGRLYQARWL HRFAVAMGPA GLIAVTAGWI VTEAGRQPFA VYGLLRTADS VAPIEAPAIA TSLAAFALVY FAMFGAGIWL LFQLFAKTPQ AHEEGPPVDK PIRSAGFTAR PALAGGARHP PAE
|
| |