Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NSE_0066 |
Symbol | |
ID | 3931493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Neorickettsia sennetsu str. Miyayama |
Kingdom | Bacteria |
Replicon accession | NC_007798 |
Strand | + |
Start bp | 58542 |
End bp | 59210 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637900222 |
Product | putative lipoprotein |
Protein accession | YP_505967 |
Protein GI | 88608037 |
COG category | [S] Function unknown |
COG ID | [COG3346] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.247976 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAAG CTTTTGTTCT CTGCATTTTA ATCTCTTTCT TTTTGGGTTG TTGGCAAGTA AAGAGGTTCC TTTTTAAACG TGAGGCATAT GAAAATATTA CAACGTGCCA TGCTACCACC CTAGGTGATC CACGCAAATA CTGTAATTTT GTTGGTAAGC TTAGTTTCTA CGAATATGGT GATATTTATC TCCTCTATAA GGATTCCAGG CATTTCAATA TACTCGTTCC ATTTGCTGCT GAGGGGAAAG TTGTTCTAGT GAATGTCGGT TATGTTAGGA AAGAAGAAAA AGATAGGGCA AGAGAGATGA TTCTCCAGAT CTTAAAATCT CACAAAGAGT TTGTTTTCAA AGGTTACTTA TCTCCAGTAA GAGGATCTAA AATTCCTCTT GTCAGAAACG ACGTTACTAA TTTAGAACTT TATTCTCTAG ATATGAAAGA AATTGGGTCG AATTTTAGGT TACCAGTTCT AGAATATATT CTGTACTCAA CTTCGAATGA TTTTATCGCG ATCTATCCTG AGATGATTTT ATCACTTCAG AGGCCGCAGC TGAAAATAAT GATGCACTTC TGGTATGCGT TCATGTGGTA TGCAGTTGCG TGTATCGGAC TGATTTACTA TTTCTTTGGC TCGAGAAAGA TAGCACAGAC CTCACCTTCC AATGAATAA
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Protein sequence | MEKAFVLCIL ISFFLGCWQV KRFLFKREAY ENITTCHATT LGDPRKYCNF VGKLSFYEYG DIYLLYKDSR HFNILVPFAA EGKVVLVNVG YVRKEEKDRA REMILQILKS HKEFVFKGYL SPVRGSKIPL VRNDVTNLEL YSLDMKEIGS NFRLPVLEYI LYSTSNDFIA IYPEMILSLQ RPQLKIMMHF WYAFMWYAVA CIGLIYYFFG SRKIAQTSPS NE
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