Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrad2831_1612 |
Symbol | |
ID | 6137640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium radiotolerans JCM 2831 |
Kingdom | Bacteria |
Replicon accession | NC_010505 |
Strand | - |
Start bp | 1717351 |
End bp | 1718376 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 641627318 |
Product | histone deacetylase superfamily protein |
Protein accession | YP_001754290 |
Protein GI | 170748030 |
COG category | [B] Chromatin structure and dynamics [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.992447 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.000235913 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGCATCG TCCACACGCC CGATTCGAGC CGGCACGACC CCGAACGCTA CATGCGGCGC GGCGCGGCGA TCCCGCATCC CGAGCAGGCG GCCCGCTACG CGATCCTGCG GGACGCGGCC GCCCGGGGCG GCCACGCCCT CGCCGAGCCG GCCGATCACG GCCTCGAGCC GATCCGCGCG GTGCACGACC CGGACTACGT GGCGTTCCTG GCCGAGGCCT GGGCGCGCCG GGACGCGATC CCCGGCATCG GCGACGAGAT CCTGACCGGG TCCTTCGCCC GGCCGCAGAT GCACCGGAAG CCCCCCGGCC TCCTCGGGCG CCTCGGCCTC TACACCGCCG ACACCTCGAC GCCGATCCGC GCCGGCACCT GGGCGGCGGT CTACGGGTCG GCGCAGTGCG CGGTCGCGGC CGCCGACGCG GCGCTGGCGG CGGGGCACGC CTACGCCCTG TGCCGCCCGC CCGGCCACCA CGCCTACGCG GACTCCGCGG GCGGCTTCTG CTTCCTCAAC AACAGCGCCA TCGCGGCCGA GCGGATGCGC GCCGCGACCG GCGGCCCGGT GGCGATCCTC GACATCGACG TCCATCACGG CAACGGCACG CAGGGGATCT TCTACGCCCG CGCCGACGTG CTGACCGTCT CGGTCCACGC CGACCCGTCC GACTACTTCC CGTTCTTCGC CGGCTACGCC GACGAGACCG GCGCCGGGGC GGGGGCGGGG TTCAACCGCA ACCTGCCGCT GCCGCCGGGC TCGGGCGACG CGCCCTGGCT CGAGGCCGTG GCGGCGGGCC TCGCGGCCAT CGCCGCATAC CGGCCCCGGG CCCTCGTGGT GGCCCTGGGC CTCGACGCCG CCGCGGACGA TCCGATCGGC GCCCTCGCGG TCTCTCGCGC GGGCTTCGTC GGGGCCGCGG AGCGGATCGC CCGGGCCGGG CTGCCCACGG CCCTGGTCCA GGAGGGCGGC TACCTCTGCG CGGCCCTGCC GGACAACCTC GCGGCCTTCC TCGCCGCCTT CGACGCCGCG CGCTGA
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Protein sequence | MRIVHTPDSS RHDPERYMRR GAAIPHPEQA ARYAILRDAA ARGGHALAEP ADHGLEPIRA VHDPDYVAFL AEAWARRDAI PGIGDEILTG SFARPQMHRK PPGLLGRLGL YTADTSTPIR AGTWAAVYGS AQCAVAAADA ALAAGHAYAL CRPPGHHAYA DSAGGFCFLN NSAIAAERMR AATGGPVAIL DIDVHHGNGT QGIFYARADV LTVSVHADPS DYFPFFAGYA DETGAGAGAG FNRNLPLPPG SGDAPWLEAV AAGLAAIAAY RPRALVVALG LDAAADDPIG ALAVSRAGFV GAAERIARAG LPTALVQEGG YLCAALPDNL AAFLAAFDAA R
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