Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_0356 |
Symbol | |
ID | 5411122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 349465 |
End bp | 350637 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640867570 |
Product | aminotransferase, class V |
Protein accession | YP_001403519 |
Protein GI | 154149901 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
TIGRFAM ID | [TIGR03402] cysteine desulfurase NifS |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.230832 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAAAA TTAACCGTCC AATATACATG GACTCTCACG CCACCACACC GGTGGATCCC CGTGTACTTG AAGCAATGCT TCCCTATTTT TCCGATATCT TCGGGAATGC TGGCAGCATC GACCATGCAT ATGGAGCTGT TGCTGCCGAG GCCGTGAAGA AAGCCCGGGA ACAATGTGCC CACCCCTTGA ACGCCCATCC CGAGGAAATC ATTTTCACAA GCGGGGCGAC CGAGGCAAAT AATATCGCCA TCCTTGGGAC CGCTGAGCAG TACGCCGAGA AGGGTGATCA CATCATCACC TGTGTTACCG AGCACAAGGC AGTTCTCGAT ACCTGCAAAC ATCTCCAGAA AACTGGGAAG TCTGTGACGT TCTTACCGGT CGATCAATAC GGCCTTGTCG ATCCGGGTCA GGTTGAAGAT GCCATCACGG ACAAGACTGT TCTGATCTCC ATCATGACCG CCAATAACGA GATTGGTACG ATTGCTCCCA TCAAAGAGAT TGGAAAGATC GCACACGAGC ATGGCGTGAT CTTTCACACC GATGCAGCGC AGGCAGTCGG GCATATTTCG ATAGATGTTA AAGAGATGAA TATCGATCTC CTCTCATTTT CCGGTCACAA GATCTACGGC CCCAAAGGGA TCGGGGGGTT GTATATCCGG GGCAGCAATC CCCGAGTAAA ACTGGCACCA ATTGTTTTTG GCGGTGGGCA GGAGAAAGGG CTCCGGTCAG GTACGCTGAA TGTGCCGGGA ATTGTTGGGC TCGGAAAGGC GCTTGCAGTC GCCGAGAAAG AGATGGCAAA AGAGGAGAAG CAATACCGCA AATGGACCAC GCAGATGTTC GATGCGTTCA AAGATGCGTA TCCCTCTGTG ATGCTGAACG GACATCCCAC GAAAAGACTC GCTCACAATC TGAATGTATG TTTCCCCGGC ATTGAGAGCA AGGCGCTGAT TCATCTGTTG AAGGATGACG TGTCGATCTC TGCCGGGTCT GCGTGTACGA CAACAAGTGT TGAACCGTCG CATGTGTTGT TGGCAATTGG GCGGACAGAA GAGGAGTCGC ACTGGGCGGT GCGGTTTGGG TTAGGGAGAG GAAATACAGA AGAAATTATT GAATATACGA TAATCACACT AAAGGACGAT TTAAATAAAA TAAAAAAAAT TTCTGATATT TGA
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Protein sequence | MEKINRPIYM DSHATTPVDP RVLEAMLPYF SDIFGNAGSI DHAYGAVAAE AVKKAREQCA HPLNAHPEEI IFTSGATEAN NIAILGTAEQ YAEKGDHIIT CVTEHKAVLD TCKHLQKTGK SVTFLPVDQY GLVDPGQVED AITDKTVLIS IMTANNEIGT IAPIKEIGKI AHEHGVIFHT DAAQAVGHIS IDVKEMNIDL LSFSGHKIYG PKGIGGLYIR GSNPRVKLAP IVFGGGQEKG LRSGTLNVPG IVGLGKALAV AEKEMAKEEK QYRKWTTQMF DAFKDAYPSV MLNGHPTKRL AHNLNVCFPG IESKALIHLL KDDVSISAGS ACTTTSVEPS HVLLAIGRTE EESHWAVRFG LGRGNTEEII EYTIITLKDD LNKIKKISDI
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