Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_0004 |
Symbol | |
ID | 8533117 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | + |
Start bp | 4029 |
End bp | 6482 |
Gene Length | 2454 bp |
Protein Length | 817 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 646382383 |
Product | DNA gyrase, B subunit |
Protein accession | YP_003261917 |
Protein GI | 261854634 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.127407 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGATA ACACCCCAAA CGACGCGAGC CAAAACGCTG GCCAAAGCTC TGGTTACGAC TCAACCAGTA TAAAAGTCCT CAAAGGACTG GATGCCGTTC GTAAGCGCCC AGGCATGTAC ATCGGCGACA CGGACGACGG CAGCGGCTTG CACCACATGG TGTTCGAAGT GGTGGATAAC GCGGTCGATG AGGCGTTGGC CGGGCACTGC GATACCGTCA CCGTCACCAT GCATGCCGAT GGCTCCGTTT CGGTGTCGGA TAATGGCCGT GGCATCCCGG TAGACATCCA TGCCGAAGAA GGTGTTTCGG CGGCAGAAGT CATCATGACC GTGCTGCACG CGGGCGGTAA GTTCGACCAG AACAGTTACA AGGTCTCCGG TGGCTTGCAT GGTGTGGGCG TTTCGGTGGT GAATGCGCTT TCCGACGAGT TGGAGCTGGA CATCTATCGT GGCGGCCATG CGTACCACCA GTCGTACCGT CTGGGTGTTC CACAAGCGCC GTTGGCCGAA GTGGGCGCTA CGGAGAAATC GGGTACCTCC ATCCGGTTCC TGCCCAGCCC CACCATTTTC ACGGATGTCG TTTTCCACTA CGACATTCTG GCAAAGCGTC TGCGTGAACT CTCCTTTCTG AATTCGGGCA TTCGCGTATT TCTGAACGAC GAGATTTCAG GGCGTGCCGA CACGTTCTAC TACGAAGGCG GCATTCGCGC GTTTGTCGAG CATCTCAACA AAGGCAAAAC CGTTATCCAC AAGAATGTTC TGAGCTTCTC GGGGCAGAAG GATTCGGTTC TGGTTGAGTT GGCCTTGCAA TGGAATGATT CGTACCAGGA AAACCTGTTC TGCTACACCA ATAACATTCC GCAACGCGAT GGCGGCACGC ATTTAACAGG CTTTCGCACG GCGCTCACGC GGACTTTGAA CGACTACATG GAACGCGCGG GCATTCTTAA AAAAGCCAAG GTATCCACCT CGGGTGAAGA TTGGCGCGAA GGCTTGGTTG CGGTCATTTC CGTGAAGGTG CCGGACCCGA AGTTTTCCTC ACAAACCAAA GAAAAGCTGG TGTCATCTGA GGTTAAATCG GCGGTTGAAT CGCTGACTTC TGAACGACTG GCAGAGTTTC TGGAAGAAAA TCCGCAAGAA GCCCTGCTCA TTACCAACAA GATCATCGAA GCGGCCCGTG CCCGTGAGGC AGCGCGACGC GCGCGTGAAA TGACGCGGCG CAAAGGCGCA TTGGATATCG CCGGCTTGCC CGGCAAGCTT GCCGATTGCC AGGAAAAGGA CCCGGCTCTG TCCGAAATTT ATCTGGTGGA AGGTGACTCG GCGGGTGGTT CGGCCAAGCA AGGCCGGGAT CGCCGCACAC AGGCGATTTT GCCGCTCAAA GGTAAAATTC TGAATGTTGA AAAAGCCCGT TTCGACAAAA TGCTCTCGTC GGCTGAAGTC GGCACCCTGA TCACCGCGCT TGGTTGCGGT ATTGGTCGGG AAGACTTCAA CCCGGACAAA CTGCGCTACC ACCGCATCAT CATCATGACC GATGCGGACG TGGACGGCAG TCACATCCGC ACCCTGCTGC TGACGTTCTT CTATCGGCAA ATGAAGGAGC TCGTCGAGCG TGGACACATT TATATTGCCC AGCCGCCGCT GTATAAGGTT AAAAAAGGTA AGCAGGAGCA GTACCTCAAG GATGATTTGG CGCTGAACCA GTATCTTCTG CAATTGGCCG TTGATGGTGC CGCGCTCCAA GTCAACGCGG AAGCGCCGCT TATTTCTGGC CCTGCGCTGG AGTCCATGGC GCGTGAGTAT CTGGTTGCGC AGGCCGTGAT CGATCGTCTG TCGCATCGGT ACGATCCAGC TGCACTGAAG GCCGTGTTGC ATTTGCCACC AATGACAGCA GCGGAAATTG TCGAAGATAG CGCGCTATTC GAAGCCTGGC TTAATCGCTT TACCGAATCC ATGAACCAGT TTGCCGACGC GGGCGTAAAT TATTCATCCC GGTTTGCGCG CACAGAGGAA GGCCTCGCGG GGATTCAAAT CACGCGAAGT CAGCACGGTG TTTCACATGA AACATTCTTG CCCGCTGGTT TCTTCTCAAC CGCTGATTAT CGCGTGTTGG GCGAATTGGC CATCCAGCTT GATGGCTTGA TTGGTGAAGA CGCGCGCGTA TTGCGTGGCG AGAAGAGCGC GCCGATCACC CATTTCGAGC AAGCTATTGA CTGGCTGATG CAAGAAGGGC GTCGCGGCCT CGGCATTCAG CGCTACAAAG GTCTGGGCGA GATGAACCCG GATCAGTTGT GGGAAACCAC GATGAACCCG GAAACCCGTC GGCTGCTGCA AGTGCGCATT GAAGATGCCA TTGCCTCGGA TGAAATCTTT ACCATTCTCA TGGGCGATCT GGTTGAGCCT CGTCGTGATT TCATCGAGAA ATTCGCCCTG TCCGCCGTCA ACATCGATAT CTGA
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Protein sequence | MSDNTPNDAS QNAGQSSGYD STSIKVLKGL DAVRKRPGMY IGDTDDGSGL HHMVFEVVDN AVDEALAGHC DTVTVTMHAD GSVSVSDNGR GIPVDIHAEE GVSAAEVIMT VLHAGGKFDQ NSYKVSGGLH GVGVSVVNAL SDELELDIYR GGHAYHQSYR LGVPQAPLAE VGATEKSGTS IRFLPSPTIF TDVVFHYDIL AKRLRELSFL NSGIRVFLND EISGRADTFY YEGGIRAFVE HLNKGKTVIH KNVLSFSGQK DSVLVELALQ WNDSYQENLF CYTNNIPQRD GGTHLTGFRT ALTRTLNDYM ERAGILKKAK VSTSGEDWRE GLVAVISVKV PDPKFSSQTK EKLVSSEVKS AVESLTSERL AEFLEENPQE ALLITNKIIE AARAREAARR AREMTRRKGA LDIAGLPGKL ADCQEKDPAL SEIYLVEGDS AGGSAKQGRD RRTQAILPLK GKILNVEKAR FDKMLSSAEV GTLITALGCG IGREDFNPDK LRYHRIIIMT DADVDGSHIR TLLLTFFYRQ MKELVERGHI YIAQPPLYKV KKGKQEQYLK DDLALNQYLL QLAVDGAALQ VNAEAPLISG PALESMAREY LVAQAVIDRL SHRYDPAALK AVLHLPPMTA AEIVEDSALF EAWLNRFTES MNQFADAGVN YSSRFARTEE GLAGIQITRS QHGVSHETFL PAGFFSTADY RVLGELAIQL DGLIGEDARV LRGEKSAPIT HFEQAIDWLM QEGRRGLGIQ RYKGLGEMNP DQLWETTMNP ETRRLLQVRI EDAIASDEIF TILMGDLVEP RRDFIEKFAL SAVNIDI
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