Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_0020 |
Symbol | |
ID | 6066592 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 20174 |
End bp | 21790 |
Gene Length | 1617 bp |
Protein Length | 538 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641599425 |
Product | PTS system, alpha-glucoside-specific IIBC subunit |
Protein accession | YP_001723035 |
Protein GI | 170018081 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific [COG1264] Phosphotransferase system IIB components |
TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component [TIGR00852] PTS system, maltose and glucose-specific subfamily, IIC component [TIGR02005] PTS system, alpha-glucoside-specific IIBC component |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCAGTC AAATTCAACG CTTTGGCGGC GCGATGTTCA CGCCAGTGCT GCTGTTTCCC TTCGCCGGGA TTGTGGTGGG TCTTGCCATC TTGTTGCAAA ACCCGATGTT TGTCGGGGAA TCACTGACCG ATCCGAACAG TTTATTCGCG CAAATCGTAC ACATTATTGA AGAGGGCGGT TGGACGGTAT TCCGTAATAT GCCGCTGATT TTTGCTGTCG GTTTACCCAT TGGCCTTGCT AAGCAAGCGC AGGGGCGTGC TTGTCTGGCG GTGATGGTGA GTTTCCTGAC CTGGAACTAT TTCATTAATG CGATGGGAAT GACCTGGGGA AGTTACTTCG GCGTCGATTT CACTCAGGAC GCGGTGGCAG GTAGCGGTCT GACAATGATG GCCGGGATTA AAACCCTCGA TACCAGCATT ATCGGCGCAA TTATCATTTC CGGCATTGTG ACGGCGCTGC ATAACCGTCT GTTCGATAAA AAACTGCCGG TGTTTCTCGG CATTTTCCAG GGGACGTCTT ATGTGGTGAT TATCGCCTTC CTGGTGATGA TCCCCTGTGC CTGGCTGACA TTGCTCGGCT GGCCAAAAGT ACAAATGGGG ATTGAATCTC TGCAAGCGTT CCTGCGTTCG GCGGGTGCGC TTGGGGTGTG GGTTTACACC TTCCTCGAAC GTATTCTGAT CCCAACCGGT TTACACCACT TCATCTACGG ACCGTTTATC TTTGGTCCGG CAGCTGTTGA AGGCGGCATT CAGATGTACT GGGCGCAGCA TCTGCAAGAG TTCAGTCTGA GCGCCGAGCC GCTGAAATCG TTGTTCCCGG AAGGCGGTTT TGCCCTGCAC GGTAACTCAA AAATCTTTGG TGCCGTGGGC ATTTCTTTAG CGATGTACTT CACTGCCGCA CCGGAAAATC GGGTAAAAGT GGCGGGCTTG CTGATCCCCG CAACCTTAAC CGCCATGCTG GTGGGAATTA CCGAACCGCT GGAATTTACC TTCCTGTTCA TTTCACCGTT GCTGTTTGCG GTACACGCTG TGCTTGCGGC CTCAATGTCG ACCGTAATGT ATCTCTTTGG TGTGGTGGGC AACATGGGCG GAGGTCTGAT TGACCAGGTT TTACCGCAAA ACTGGATCCC GATGTTCAGC AACCACGCGG ATATGATGCT GACCCAAATC GCCATTGGGT TGTGCTTTAC CCTGCTGTAC TTCGTGGTTT TCCGCACCCT GATACTGCAG TTCAACATGT GTACGCCGGG ACGTGAAGAT GCGGAAGTGA AACTCTACTC AAAAGCCGAA TATAAAGCCT CGCGAGGCCA AACCACCGCT GCAGAGCCAA AAAAAGAGTT GGATCAGGCT GCCGGTATCC TGCAAGCCCT GGGCGGGGTC GGCAATATCT CCAGCATCAA CAATTGCGCG ACGCGTCTAC GTATTGCACT GCATGACATG TCACAAACGC TGGATGACGA AGTCTTTAAA AAGCTGGGAG CGCACGGCGT CTTCCGTAGT GGCGATGCCA TTCAGGTGAT CATTGGTCTG CATGTATCTC AGCTGCGTGA ACAGCTCGAT AGCTTAATTA ATTCTCATCA ATCAGCAGAA AATGTTGCCA TTACGGAGGC AGTATAA
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Protein sequence | MLSQIQRFGG AMFTPVLLFP FAGIVVGLAI LLQNPMFVGE SLTDPNSLFA QIVHIIEEGG WTVFRNMPLI FAVGLPIGLA KQAQGRACLA VMVSFLTWNY FINAMGMTWG SYFGVDFTQD AVAGSGLTMM AGIKTLDTSI IGAIIISGIV TALHNRLFDK KLPVFLGIFQ GTSYVVIIAF LVMIPCAWLT LLGWPKVQMG IESLQAFLRS AGALGVWVYT FLERILIPTG LHHFIYGPFI FGPAAVEGGI QMYWAQHLQE FSLSAEPLKS LFPEGGFALH GNSKIFGAVG ISLAMYFTAA PENRVKVAGL LIPATLTAML VGITEPLEFT FLFISPLLFA VHAVLAASMS TVMYLFGVVG NMGGGLIDQV LPQNWIPMFS NHADMMLTQI AIGLCFTLLY FVVFRTLILQ FNMCTPGRED AEVKLYSKAE YKASRGQTTA AEPKKELDQA AGILQALGGV GNISSINNCA TRLRIALHDM SQTLDDEVFK KLGAHGVFRS GDAIQVIIGL HVSQLREQLD SLINSHQSAE NVAITEAV
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