Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_2400 |
Symbol | |
ID | 7174334 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | - |
Start bp | 3032972 |
End bp | 3034093 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643540930 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002436809 |
Protein GI | 218887488 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 90 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACCG GCACCGACCG CACCAGTCCG CAAACCCTCA CCGCCGACGC GCCCTTCACC GTGCCTGCCC CGGCCACCGT CCCGGACGCG GTCCCGGACA ACACCCTGCT GCGCCAGTTG CTGTCGCGGC CCACGGCCCT GGCCGCGCTG GCCCTGCTGT GCATCATCGT GTCCATGGCC GTGTTCGCGC CTGCATTCTC GCCCCGTCCC CCGGACGACG TGGACATCAC CCGCAAGTTC GAGGCCCCCA GCCTGGAAGA ACCCCTGGGC ACCGACCACC TGGGCCGCAG CGTACTGGCC CGGCTGTGCC ACGGCACGCG GGTTTCGCTG TTCGCCGTGG GGGCCATTCT GACCTGCATC GTGGCCGTGG GGCTGACGGC GGGGTGCGTG GCGGGCTACG CGGGGGGCCG GGTGGACAGC CTGCTCATGC GCGCCTGCGA CGTGTTCATG ACCTTTCCCA CCTTCATCCT GGCGCTGTTT CTGGTGGGGG TGCTGGGTTC GGGGCTGACC AACGTGATCA TCGCCGTGGC CTGCACCCAC TGGGCCTGGT ACGCGCGGTT CGCGCGCGGG CTGGTGCTGG GGCTGAAGCA GCGCGAATAC GTGCTGGCCG CGCGCGCGGC GGGCACCCGC CCGGCGCGGC TGGTGCTGCG GCACATCCTG CCGCCGGTGC TGGCCCAGCT GCTGGTCATG GCCGGGCTGG ACGTGGGCCA CATGCTGCTG CACGTCTCCG GCCTGTCCTT CCTGGGTCTT GGGGTGCGCC CCCCGACGCC GGAATGGGGG GTGATGATCG GCGATGCGCG CGAATACATC GGCGCCCACC CGGAACAGCT GCTGTACCCC GGCCTGATGA TCTTCGTGAC GGTGATGGCC TTCAACCTGC TGGGCGATGC CCTGCGTGAC GCGCTGGACC CCGCCGCCGC GCGCGACACG GAACGGGACG CGGCCTGCGC GGCGCACGGC CCCGATGGGA CTGACGGGTT TGGCGGACCG TATGAGCCCG ACGAGCCGGA CGGGTTGAAT GAGCCGGACA AGTGGGACGA GTTGAATGCG ACAGGCGGCG AAGACGGCAG CCCTGCGGAT TTCCATGGTG TGCGCGCGGG TGCGCGCGAG GGGGCGGCAT GA
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Protein sequence | MTTGTDRTSP QTLTADAPFT VPAPATVPDA VPDNTLLRQL LSRPTALAAL ALLCIIVSMA VFAPAFSPRP PDDVDITRKF EAPSLEEPLG TDHLGRSVLA RLCHGTRVSL FAVGAILTCI VAVGLTAGCV AGYAGGRVDS LLMRACDVFM TFPTFILALF LVGVLGSGLT NVIIAVACTH WAWYARFARG LVLGLKQREY VLAARAAGTR PARLVLRHIL PPVLAQLLVM AGLDVGHMLL HVSGLSFLGL GVRPPTPEWG VMIGDAREYI GAHPEQLLYP GLMIFVTVMA FNLLGDALRD ALDPAAARDT ERDAACAAHG PDGTDGFGGP YEPDEPDGLN EPDKWDELNA TGGEDGSPAD FHGVRAGARE GAA
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