Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_2449 |
Symbol | |
ID | 4955961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | - |
Start bp | 2664192 |
End bp | 2664845 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640181621 |
Product | HAD family hydrolase |
Protein accession | YP_001113784 |
Protein GI | 134300288 |
COG category | [R] General function prediction only |
COG ID | [COG0546] Predicted phosphatases |
TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0190416 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATAAAAA CAATACTATT TGATTTGGAT GGCACACTCC TGGATTCACT GCCTTTAATT AAGAGGACCT ATAAGAGGGT CTTTCAAGAA ATGAATATAC CCTGGGCTAA CGGCGAGGTC ATGAAATGTA TTGGATTGCC GCTGGTTGAT ATCGGTAAGA AGTTTGCCGG AGAGGAAAGG CACGCAGAAT TTTTTAGTTT ATACCAGCAG CATTATGCCA TCGAGCACGA TGCCATGACA AAAGCCTACC CCGGTACCAT GGAAATGCTA GAAGACCTGC ACCAAAGAAG TCTTCGCCTG GGCGTGGTTA CTTCCAAATC CCGCCGAGTT GCATTGAGAA GCACAGGGTT TTTAGGAATT GATCGCTACA TGGATGTTCT GATCGGTGTA GAGGATGTGG ACCGTCATAA GCCTCAGCCA GACCCTATTT TTAAAGCCCT GGAACAAATG CAAGTGCCTG CAGAAGGTGC CGCTTACATC GGGGATAGCC CCTTTGACAT TATGTCTGCC AAAGCTGCCG GCGTAACTTC CATCGGCGTT AGCTGGGGAA TGGCAGAGGG TGATGAACTC CTGCGCTTTG AACCGGATTA TCTTCTAAAC CAATGGTCAG ATTTATTGTT AGTACTGGAA AATGATACCG AATTAATGGA CTAA
|
Protein sequence | MIKTILFDLD GTLLDSLPLI KRTYKRVFQE MNIPWANGEV MKCIGLPLVD IGKKFAGEER HAEFFSLYQQ HYAIEHDAMT KAYPGTMEML EDLHQRSLRL GVVTSKSRRV ALRSTGFLGI DRYMDVLIGV EDVDRHKPQP DPIFKALEQM QVPAEGAAYI GDSPFDIMSA KAAGVTSIGV SWGMAEGDEL LRFEPDYLLN QWSDLLLVLE NDTELMD
|
| |