Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0454 |
Symbol | rplB |
ID | 5131208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | + |
Start bp | 455167 |
End bp | 455991 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640529356 |
Product | 50S ribosomal protein L2 |
Protein accession | YP_001213917 |
Protein GI | 147669099 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0090] Ribosomal protein L2 |
TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000232989 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCAATAA AGATATATCG CCCTACTTCC CCGGGCCGCC GGCATCACAG TGTTTCCTCC TTTGAGGAAA TTACCAAGAG CCGGCCGGAG AGAGCTCTCT TGGTTTCGGT CAAGAATGAT TCAGGCCGAA ATAACCAGGG GCGCGTAACC GTTCGCCATA GGGGTGGTGG TAGCAAAACA CAGATTCGCG TTATAGATTT CAAACGTAAT AAGCTGGATG TGCCTGGAAG AGTGGCCGCT ATCGAGTATG ATCCTAACAG GACTGCCCGT ATAGCTCTGG TCTTCTACAC TGATGGTGAG AAACGCTATA TTTTGGCTCC TTCAGATTTG AAGGTTGGCG ATGTGATTAT GGCGGGTGAA AATGCTGAGC CCAAGAGCGG CAATGCTCTG CCTCTCAGTT CCATACCCAC CGGTACATTC ATTCATAATA TTGAGATTAT CAAGGGCAAG GGCGGCATAA TGGTACGCAG TGCCGGTGCT GCCGCTCAGC TGATGGCTAA AGAGGATGAT TATGCGCTTG TGCGTTTGCC TTCCGGTGAA ATGCGCAAGG TGCGGAGTGA TTGCTCTGCT ACCGTAGGCC AGATTGGCAA TATAGAGCAT GGTACCCTTG AAATAGGTAA GGCTGGGCGC AACCGCCACT TGGGTTGGAG ACCGACTGTC AGAGGTTCTG CCATGTCACC CAATAACCAT CCTCACGGCG GTGGTGAATG TCGCTGTCCT ATTGGTATGA CCGGGCCGAA AACTCCCTGG GGTAAACCGG CTTTGGGTTA TCGTACCCGC AAGGCTAAAT ACTCTGACAA ACTTATCGTG AAGCGGAGGG GGTAA
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Protein sequence | MAIKIYRPTS PGRRHHSVSS FEEITKSRPE RALLVSVKND SGRNNQGRVT VRHRGGGSKT QIRVIDFKRN KLDVPGRVAA IEYDPNRTAR IALVFYTDGE KRYILAPSDL KVGDVIMAGE NAEPKSGNAL PLSSIPTGTF IHNIEIIKGK GGIMVRSAGA AAQLMAKEDD YALVRLPSGE MRKVRSDCSA TVGQIGNIEH GTLEIGKAGR NRHLGWRPTV RGSAMSPNNH PHGGGECRCP IGMTGPKTPW GKPALGYRTR KAKYSDKLIV KRRG
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