Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_0040 |
Symbol | |
ID | 6027493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | - |
Start bp | 46820 |
End bp | 47074 |
Gene Length | 255 bp |
Protein Length | 84 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641592894 |
Product | AbrB family transcriptional regulator |
Protein accession | YP_001716241 |
Protein GI | 169830259 |
COG category | [K] Transcription |
COG ID | [COG2002] Regulators of stationary/sporulation gene expression |
TIGRFAM ID | [TIGR01439] looped-hinge helix DNA binding domain, AbrB family |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0507223 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAGTCAA CAGGGATTGT GCGCAAGGTG GACGAGCTGG GTCGGGTGGT CATCCCGATC GAACTCCGCA GGACACTCGG AATCGAGGAG AAGGACGCGC TGGAAATCTA CGTAGACAAT GAGAAAATCA TTCTCAAAAA GTACGAGCCG GCGTGTGTCT TCTGTGGCAA TGCGGGTGAC GTCCAGCACT ACCGCGGAAA GCTGGTTTGC CGCCACTGTG CCGCCGAGAT GTTCCAAAAA GCCCACGCCA TGTAG
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Protein sequence | MKSTGIVRKV DELGRVVIPI ELRRTLGIEE KDALEIYVDN EKIILKKYEP ACVFCGNAGD VQHYRGKLVC RHCAAEMFQK AHAM
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