Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_4241 |
Symbol | |
ID | 6127072 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 1194900 |
End bp | 1196153 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641651347 |
Product | polysaccharide export protein |
Protein accession | YP_001777880 |
Protein GI | 170736620 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.238114 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGACCT CGAACGTTTC GACCGCGGCC GGCGCACGCC GGCGTGCGGT ACACGCGATA CGCACGGCCT CGCTCGCGAC GCTGGCCGGC CTCGCGCTGT CCGGATGCGC GCTCGCGCCC GGCATGCGAA TGGGCGATCA CCCGTTCGTC CGGGAACTGC GCGCGACGCG CGCGCCCGAT GCGGCGCCGG GCATCGCGCG CGCGGACGCA CCCGCGCATC CGGCCGACGA CGGTGCACCC GCACCCGCGG ACGCATCGCC TGCGCGCCTG CCCGTGCCCA TCGTGCAGAT CGACCCGCAG TTGATCCAGC GCCAGCGCGC CGAGAAGGCG GCCGCGACGG CCGCGCTGTC GGCGCTCGAC GCCCCCGCCG CTTCGCGCTA CCGGATCGGC CCCGGCGACG TGCTGCAGAT CACCGTCTGG GACCACCCGG AGCTGGCCGC CGCACAGCCC GGCTCGCCGC AGACGCCGCC GCGCGCGGCC GATCCGGTTG CCGGGTTCGT CGTCGACGAT CGCGGCAATC TGACGTTTCC GTATGCCGGC AAGCTGAAAG TCGCGGGCCT GAGCGCCGCC GACGCCCAGG CGCGCGTCAC GCAGGCGCTC GCGCGCGTCT ATCGCGACCC GCAGGTGACG CTGCGTGTCG CGTCGTACCG TTCGCAGCAG GTCTATATCG ACGGCGAAGT GCATGCGCCG GGCGCGCAGG CGGTCAACGA CGTGCCGATG ACGCTCGCCG ACGCGCTCGC CCGCGCCGGC GGTTTCACGC CGGCGGCCGA CCAGAGCGAC GTGACGCTCG TTCGCGACGG TGTGCCGATG CGCATCGACG TCGCGAAGAT GATTCGCGAG CACCGCAATC CGGCCGACAT CGTGCTGCGC GCCGGCGATC TGCTGAAGAT CGCCGCGCGC GACGACAACG GTGTATACGT GATGGGCGAA GTCAACCGCC CGCTGCGCGC GCTCCCGAAG CGCAACGGCC GTCTCACGCT CGGCGACGCG CTGCTGCAGG CCGGCAGCAT CAACTCGAAC ACGGCGGATG CCGCGCAGAT GTTCGTGATC CGCGGCGATG CGCGCGGCAC GCCGACCGTG TTCCATCTCG ACGCGCGCTC GCCGGTCGCG ATGGTGCTCG CGAACGAGTT CGAGCTGGAA CCGAACGACA CCGTCTACGT CGACGGCAAC GGCCTCGTGC GCTTCAGCCG CGTGCTCGCG CTGCTGTTGC CGAGCGTCAA CACGGGCGCC GCCGCCGCGC TGGCAACCAA ATGA
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Protein sequence | MKTSNVSTAA GARRRAVHAI RTASLATLAG LALSGCALAP GMRMGDHPFV RELRATRAPD AAPGIARADA PAHPADDGAP APADASPARL PVPIVQIDPQ LIQRQRAEKA AATAALSALD APAASRYRIG PGDVLQITVW DHPELAAAQP GSPQTPPRAA DPVAGFVVDD RGNLTFPYAG KLKVAGLSAA DAQARVTQAL ARVYRDPQVT LRVASYRSQQ VYIDGEVHAP GAQAVNDVPM TLADALARAG GFTPAADQSD VTLVRDGVPM RIDVAKMIRE HRNPADIVLR AGDLLKIAAR DDNGVYVMGE VNRPLRALPK RNGRLTLGDA LLQAGSINSN TADAAQMFVI RGDARGTPTV FHLDARSPVA MVLANEFELE PNDTVYVDGN GLVRFSRVLA LLLPSVNTGA AAALATK
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