Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_1284 |
Symbol | |
ID | 4450976 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | - |
Start bp | 1412454 |
End bp | 1413188 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639693320 |
Product | DNA polymerase III subunit epsilon |
Protein accession | YP_834929 |
Protein GI | 116689306 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family [TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.000499827 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCCAGA TCATTCTCGA TACCGAAACC ACCGGCCTGA ACGCCCGCAC GGGCGACCGT CTCATCGAAA TCGGCTGCGT CGAGCTGCTG AACCGGCGGC TCACCGGCAA CAACCTGCAC TTCTACGTGA ATCCCGAGCG CGACAGCGAT CCGGGCGCAC TGGCGGTGCA CGGCCTCACG ACCGAATTCT TGAGCGACAA GCCGAAATTC GCGGAAGTCG CCCACCAGAT CCTCGACTTC GTGAAGGACG CCGAGCTGAT CATCCACAAC GCGCCGTTCG ACCTGGGCTT CCTCGACGCC GAATTCGCGC GGCTCGGCCT GCCGCCGTTC ACCGAGCATT GCGGCGGCGT GATCGACACG CTGGTGCAGG CCAAGCAGAT GTTCCCCGGC AAGCGCAATT CGCTCGACGC ACTGTGCGAC CGCTTCGGCA TCAGCAACGC GCACCGCACG CTGCACGGCG CACTGCTCGA CTCGGAGCTG CTCGCCGAGG TCTATCTCGC GATGACGCGC GGCCAGGACA GCCTCGTGAT CGACATGCTC GACGACGCGG GCGCCGACGG CGGCGCGGCG AACGGCAAAC GCGTGTCGCT CGCCGCGCTC GACCTGGCCG TGGTGACCGC GAGCGAAGAC GAGCTTGCCG CGCACCAGGC TCAGCTCGAC GAGCTCGACA AGTCGGTCAA GGGCACCTGC GTGTGGCGCC AGCCCGCCGA CACGGATACC GCCGAAGCAG CCTGA
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Protein sequence | MRQIILDTET TGLNARTGDR LIEIGCVELL NRRLTGNNLH FYVNPERDSD PGALAVHGLT TEFLSDKPKF AEVAHQILDF VKDAELIIHN APFDLGFLDA EFARLGLPPF TEHCGGVIDT LVQAKQMFPG KRNSLDALCD RFGISNAHRT LHGALLDSEL LAEVYLAMTR GQDSLVIDML DDAGADGGAA NGKRVSLAAL DLAVVTASED ELAAHQAQLD ELDKSVKGTC VWRQPADTDT AEAA
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