Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5536 |
Symbol | |
ID | 4314425 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 2606939 |
End bp | 2608822 |
Gene Length | 1884 bp |
Protein Length | 627 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638153378 |
Product | endonuclease/exonuclease/phosphatase |
Protein accession | YP_777417 |
Protein GI | 115360279 |
COG category | [R] General function prediction only |
COG ID | [COG2374] Predicted extracellular nuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.8971 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAATT CGATCGCGGC ACGCGATTTT GCCGTCAAGA TGCGTCCCGA ACCTTCGAAT TTTCTTCCTG TGTGCCACGC CATGTCACTC CTGCCGTCAT CGCTCGCGCT TGCCGCCTTT CTTGTTCTCT CCGTTCCGCC CGCCACCGCC GCGCTGCCGG TGAGCACGGG CTGCGGCGGC GCCACCACCG CGATCGCCGA CATCCGGCAT CCCGCGGGCC GCTCGCCGCT GGCCGGGCAC ACCACGTCGA TCGAAGCAGT CGTCACCGCG GCGTTCGGCG GCCCCGATGG CTTCGGCGGA TTCTTCGTCC AGCAGGCGGA CGCGCAGCGG CGACACCGGC CGGGCGTGCC GGAAGGCCTG TTCGTATATG CGCCGCATGC GCATGTGCAG CCGGGCGAGC GCGTGCACAT CACCGGCAGG ATCGAACAGA AATACGGCCG GACGCAACTC GCGTTGGCGG GCCGCGTGGC CGTCTGCGCA CGCGGGCAGA GCGTCACGCC GGCCGCGCTG ATGCTGCCGG TCGATAGTGA CGCCGTATTC GCCGCGCATG AAGGCATGCG CGTGCGCTTT CCGCAAACGC TGACGGTCAG CGATACTTAC GAACTCGGCC GCTACGGCAG CATCGTGCTC AGCCACGGCC GCCTGTACAT GCCGACTCAC GTGGCGCCGC CGGCCGAAGC CGCTGCGCAC GCGGCGGCCA ATGCACGCAA CCGCATCGTG CTCGACGACG GTTCGAGCCG CGTGAACCCT GCAACCGCCC GCTATCCGCC GCCTGCGCTG AGCGCCGCCA ACACGCTGCG CGCGGGCTAC ACGGTGCGCG GCATCGAAGG TGTGCTCGAA CTGCGCTACG GCACGTGGCG ATTGCAGCCC GTATCGTCCT CGCCACCCAC CTTCGAGGCC GCGTCGAATC CGCGGGCCGA TGCGCCCGCA CGGCATCCGC AAGCCGACGT GCGGGTCGCG TCGTTCAACG TATTCAACTA CTTCAACGGC GACGGCGCGG GCGGCGGCTT CGGCGATCCG TCCGGCCGTG GCGCGAAAAC CCCCGCCGCC TTCGCGCGGC AGGAAGCGAA GCTCGTGGCC GCGCTGCGTG CCCTGCGCGC CGACGTGATC GGCCTGATGG AAATCGCGAA CAACGGGCAC GGCCCGGCGA GCGCCGTGCA GCGGCTCGCG GCCCGGCTCG GCGGCGGCTG GCGCGCGGTC GACCCCGGCA CCGCACGGCT CGGGCGCGAT GCGATCGCGG TCGCGCTGTT GTATGACAGC CGGACGATCG AGCCCGTCGG GCGCGCCGCG ACCGTCGCGC TCGACGGCCG GAATCGCCCG CCGCTCGCGC AGACGTTCCG TCGCGTCGAC GGCACCCGCG CGTTCACGGT CGCGGTCAAC CACCTGAAGT CGAAGAATTG CCCGCACGCC ACCGGCCCGG ATCTCGACCA GTCGGACGGC CAGGGCTGCT GGAATGCAAC GCGCACGCGC GCAGCCGAAC GCGTCGCCGG CTGGCTTGCG ACGTCGCCGA CCGGCGCCGC GGCCGACGGC GTGCTGCTGA TCGGCGATCT GAACAGCTAT GCGAAGGAAG ACCCGCTGCG CGCGCTCGAA TCGCGCGGCT ACACCAACCT CGTCGCCCGC TTCGTCGGCA ATGCCGGCTA CACGTATGTA TTCCACGGCG AAGCGGGCAA CCTCGACCAC GCACTCGCGA CGCCGCCGCT CGCCGCCCGC GTGAAAGCCG TGCACACGTG GCACATCAAT GCAGATGAAC CGATTGCACT CCAAGCCGTG CCCGATTACA AAACCCCGGC GCAACAGGCC GCCTATTACG CGCCCGATGC ATACCGTTCG TCGGATCATG ATCCCGTCGT CATCGACGTT GCGCTGGAGG AAGGCGCCAC CTGA
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Protein sequence | MANSIAARDF AVKMRPEPSN FLPVCHAMSL LPSSLALAAF LVLSVPPATA ALPVSTGCGG ATTAIADIRH PAGRSPLAGH TTSIEAVVTA AFGGPDGFGG FFVQQADAQR RHRPGVPEGL FVYAPHAHVQ PGERVHITGR IEQKYGRTQL ALAGRVAVCA RGQSVTPAAL MLPVDSDAVF AAHEGMRVRF PQTLTVSDTY ELGRYGSIVL SHGRLYMPTH VAPPAEAAAH AAANARNRIV LDDGSSRVNP ATARYPPPAL SAANTLRAGY TVRGIEGVLE LRYGTWRLQP VSSSPPTFEA ASNPRADAPA RHPQADVRVA SFNVFNYFNG DGAGGGFGDP SGRGAKTPAA FARQEAKLVA ALRALRADVI GLMEIANNGH GPASAVQRLA ARLGGGWRAV DPGTARLGRD AIAVALLYDS RTIEPVGRAA TVALDGRNRP PLAQTFRRVD GTRAFTVAVN HLKSKNCPHA TGPDLDQSDG QGCWNATRTR AAERVAGWLA TSPTGAAADG VLLIGDLNSY AKEDPLRALE SRGYTNLVAR FVGNAGYTYV FHGEAGNLDH ALATPPLAAR VKAVHTWHIN ADEPIALQAV PDYKTPAQQA AYYAPDAYRS SDHDPVVIDV ALEEGAT
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