Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_2858 |
Symbol | |
ID | 4310865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 3152050 |
End bp | 3152904 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638150697 |
Product | formamidopyrimidine-DNA glycosylase |
Protein accession | YP_774748 |
Protein GI | 115352909 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAATGCCG TTTCAGACCC GCAAAACATG CCAGAGTTGC CAGAAGTCGA AGTCACGCGC CGGGGCATCG AGCCCTTTGT CGCGGGCCGC CGCGTCGAGC GTGTCGACGT CCGTACCGCG ATGCTGCGCT GGCCCGTGCC GGCGGGGCTC GCGGAGCAAT TGCGCGCGCG CGAGGTGCTC GCCGTCGAGC GTCGCGGCAA GTACCTGCTG TTCGAGGTCG ACGCGGGCTG GTTCATCGTG CATCTCGGGA TGACGGGCAC GCTGCGCGTG CTGCCCGCGG CCGGCGTGCC GGTCGCCGCG AAACACGACC ACATCGACTG GATCTTCGAC GAGTTCGTGC TGCGCTTTCG CGATCCGCGC CGTTTCGGCG CCGTGTTGTG GCACCCGCGC GAAGCGGGCG ACGTGCATGC GCATCCGCTG CTCGCGAGCC TCGGCGTCGA GCCGTTCTCG CCGGCATTCA CCGGCGCGCT GCTGCACGCG CGCACGCGCG GGCGCACGGT GTCGGTCAAG CAGGCGCTGC TCGCGGGCGA CATGGTGGTC GGCGTCGGCA ACATCTATGC GTCGGAGAGC CTGTTTCGCG CCGGCATCCG GCCGACGACC GCCGCCGGCA AGGTCTCGCT GCCGCGCTAC GAGCGACTGG CCGATGCGGT GCGCGCGACG CTCGCCGACG CGATCGAGCG CGGCGGCAGC ACATTGCGCG ACTTTGTCGG CAGCAACGGC GAAAGCGGCT ATTTCCAGCT CGACTGCTTC GTCTACGACC GTGCGGGGCT GCCTTGCCGC GTATGCGGCA CGCCGATCCG CCAGATCGTG CAGGGCCAGC GCTCGACCTA TTTCTGCCCG ACCTGCCAGC GTTGA
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Protein sequence | MNAVSDPQNM PELPEVEVTR RGIEPFVAGR RVERVDVRTA MLRWPVPAGL AEQLRAREVL AVERRGKYLL FEVDAGWFIV HLGMTGTLRV LPAAGVPVAA KHDHIDWIFD EFVLRFRDPR RFGAVLWHPR EAGDVHAHPL LASLGVEPFS PAFTGALLHA RTRGRTVSVK QALLAGDMVV GVGNIYASES LFRAGIRPTT AAGKVSLPRY ERLADAVRAT LADAIERGGS TLRDFVGSNG ESGYFQLDCF VYDRAGLPCR VCGTPIRQIV QGQRSTYFCP TCQR
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