Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_6246 |
Symbol | |
ID | 6182380 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | + |
Start bp | 833094 |
End bp | 834317 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641689373 |
Product | L-carnitine dehydratase/bile acid-inducible protein F |
Protein accession | YP_001816232 |
Protein GI | 172065520 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGCCC GCCCTCTCGA AGGTATTCGC GTCGTCGACT ACAGCCATTT CCTGGCCGGC CCCTATGTCG GGCGCTGCCT CGCGGCGCTC GGCGCCGAAG TGATCAAGGT CGAACGCCCC GGCACCGGCG ACGCCGGCCG CCAGCATGCG ACGGTCCTCG ACGACCAGCA AAGCGGCTAT TTCCTGCAGC TCAACATGGG CAAGCGCGGC GTCAGCGTGA ACATGAAGGA CGCGCGCGGC AAGGCATTCA TGCAGCGGCT GTGCGACTCC GCGGACGTGT TCATCGAGAA CTACCGCCCA GGCGCGCTGG ACAAGCTGGG GCTCGGTTAT GCGGAGTTGT CGGCCCGCAA TCCGGCGCTC GTCTATTGCT CGATCTCGGC CTACGGACAT ACCGGCCCCG ATGCGCATCG CGCGGGCTTC GGGCTGATCG CCGAGGCGAA GAGCGGCATC ATGCAGATGG TCGGCACACC GGGCGAGCGG CCGCCGCTGC TGCGGATCTC GCTCGGCGAC ATGTACACCG GCATTCACGC GGTCGCGGCC ATCAACGCCG CGCTGTTGGG ACGCGTGAAG AGCGGCCGCG GGCAGCACAT CGACATGGCG CTGTACGACA CGCTGGTCTC CATGCACGAA TATGCGGTCC AGTGCTACAC GCTGCAAGGC GTGCTGCCCG AGCAGACCGG GCACGACATG CCGACTTCGA CGCTCTATGG CGTGTTTCGC GCGGCGGACG GCGATCTCGT GATCGCCGCG CAGGTCGACG ATGCATGGAA ACGCTTCGCG ATCCTGATCG AAGCGCATGG CGGACCGGCC GGCTTCGGCG CCGACACGCG CTTTCACGAC AGCGTCGGAC GCAACGCGCA CCGCGTCGAG ATCCTGTCGG TCGTCGAGCC GTGGGTGGCC GCCCGTTCGG TTGCGTCGGT GCTCGACCTG CTCGATCGCA TCGACGTGCC GTGCGCGAAG GTACAACGCA TCGACGAGGT ACTGGCGGAT CCGCAGATCC AGGCGCGCGG CATGGTTGTC GAGCAGGAGC ACCCGCGCTA CGGCACGCTG CGCCTGCCGA ATCTGCCGTT CCGGTTCTCG GATTGCGATA CGACGATTCG CGACGTCGCG CCCGATCTCG GGCAGCACAA CGCCGACGTC GCCCGTTCGC TCGGGTTCGA GCCCGCTGAA ATCGACGCAA TGCAGGCCGA TGGTGTTCTC TACTCAAAAA CGAGCCAACG ATGA
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Protein sequence | MQARPLEGIR VVDYSHFLAG PYVGRCLAAL GAEVIKVERP GTGDAGRQHA TVLDDQQSGY FLQLNMGKRG VSVNMKDARG KAFMQRLCDS ADVFIENYRP GALDKLGLGY AELSARNPAL VYCSISAYGH TGPDAHRAGF GLIAEAKSGI MQMVGTPGER PPLLRISLGD MYTGIHAVAA INAALLGRVK SGRGQHIDMA LYDTLVSMHE YAVQCYTLQG VLPEQTGHDM PTSTLYGVFR AADGDLVIAA QVDDAWKRFA ILIEAHGGPA GFGADTRFHD SVGRNAHRVE ILSVVEPWVA ARSVASVLDL LDRIDVPCAK VQRIDEVLAD PQIQARGMVV EQEHPRYGTL RLPNLPFRFS DCDTTIRDVA PDLGQHNADV ARSLGFEPAE IDAMQADGVL YSKTSQR
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