Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4180 |
Symbol | |
ID | 6179314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 1227991 |
End bp | 1229061 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641683949 |
Product | hypothetical protein |
Protein accession | YP_001810860 |
Protein GI | 172063209 |
COG category | [R] General function prediction only |
COG ID | [COG0628] Predicted permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.664917 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGTAC ATGTGTCGCC GTCCCAGGAT TCCGCCGCGC GGCCGCGCGC TCAGCAGATC GCCCGCGCCG TGCTGTATGC GGCGCTGCTG CTGCTCGCGC TGTGGGTGAT CCGCGACTTC CTTCCCGCCA TCGCGTGGGC GTGCGTGATC GCGATCGCGT TGTGGCCGTT GCTGAAACGC TTCGAATCCG AACGCTGGTT TCGCAACCGG CCGACCCTGA TCGCGACCGT GATCACCGTG GGCGTGTCGC TGCTGGTGAT CCTGCCGGTC GCGCTCGCGC TCGGGCAGGC GATCTCGCAG GAGCACGACC TGCGCATGTG GCTGCAGTCG GTCCAGGACA ACGGCATTCC GCTGCCCGAT GTGATCGCCC GGCTGCCGTA CGGGGCCGCG CAGGTCACCG AGTGGTGGCA GGCCAATCTC GGTCATCCGC TGCATGCGGG CGCCGCGATG CACGGCGCGA GCGGCGAGAA ATTCATCGCG TTCGGGCGGC AGTTCGGCAC CAAGGTCGCG CATGCGCTGT TCGAGTTCGG CTTCATGCTG GTCACGCTGT TTGTGATCCT GAGGGCCGGC CACAAGTTGT CGGGCGCATT GCTGCACGGC GCGCGGCGCG CGTTCGGCCC CGGCGGCGGC GAGCTGATCG AGCGGATGGT CGCGGCCGTA TACGGGACGG TGACGGGGCT CGTCGTCGTC GGGCTGGGCG AGGGCGCGAT TCTCGGCGTC GCCTATGCGC TGGCGGGCGT GCCGCATGCG GCGCTGCTCG GTCTGGTCAC GGCCGTCGCC GCGATGCTGC CGTTCTGCGC GCCGATCGTG TTCTGCGGCG CGGCGCTCTG GCTGTTCGTG CAGGGGGCGA CCGTCTGGGC CGTCGTGGTG CTGGTGGTCG GCTTCGTGGT CGTGTTCGTC GCCGAGCATT TCGTGCGGCC GGTGCTGATC GGCAGCTCGA CCCGCTTGCC GTTCCTGCTC GTGCTGTTCG GCATCCTCGG CGGCGCCGAG ACGTTCGGGC TGATCGGGCT GTTCGTCGGC CCGGCGCTGA TGACGGTGCT GACGATGCTG TGGGCCGAAT GGGTCGCATG A
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Protein sequence | MRVHVSPSQD SAARPRAQQI ARAVLYAALL LLALWVIRDF LPAIAWACVI AIALWPLLKR FESERWFRNR PTLIATVITV GVSLLVILPV ALALGQAISQ EHDLRMWLQS VQDNGIPLPD VIARLPYGAA QVTEWWQANL GHPLHAGAAM HGASGEKFIA FGRQFGTKVA HALFEFGFML VTLFVILRAG HKLSGALLHG ARRAFGPGGG ELIERMVAAV YGTVTGLVVV GLGEGAILGV AYALAGVPHA ALLGLVTAVA AMLPFCAPIV FCGAALWLFV QGATVWAVVV LVVGFVVVFV AEHFVRPVLI GSSTRLPFLL VLFGILGGAE TFGLIGLFVG PALMTVLTML WAEWVA
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