Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2942 |
Symbol | cca |
ID | 6178416 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 3262202 |
End bp | 3263443 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641682718 |
Product | multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase |
Protein accession | YP_001809634 |
Protein GI | 172061982 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0867052 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.615675 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATCT ACGCAGTAGG CGGAGCGATC CGCGACGAAT TGCTCGGCGT GCCGGTGCAG GACCGCGACT ACGTGGTGGT GGGCGCGACG CCCGAGCAGA TGGTCGCCCA GGGCTTCCGG CCGGTCGGCA AGGATTTCCC GGTGTTCCTG CATCCGGACA CGCAGGAGGA ATACGCGCTC GCGCGCACCG AGCGCAAGAC GGCGGCCGGC TATCACGGCT TCCAGTTCTA CTTCGCGCCG GACGTGACGC TCGACGAGGA TCTCGCGCGG CGCGACCTGA CGATCAACGC GATGGCGCGC GAAGTGAGCC CGGAGGGCGC GCTGGTCGGG CCGGTGATCG ATCCGTTCGA CGGACAGGCC GACCTGCGCG CGCGCGTGTT CCGGCACGTG GGCGACGCGT TCGTCGAGGA TCCGGTGCGA ATCCTGCGGA TCGCGCGTTT TGCCGCGCGC TTCGCGGATT TCACGGTCGC GGACGACACG CTCGCGCTGA TGCGGCGCAT GGTCGACGCC GGCGAAGCGG ACGCGCTGGT GGCCGAACGC GTGTGGCAGG AAATCGCGCG CGGACTGATG GAGGCGAAGC CGTCGCGGAT GTTCGCGGTG CTGCGCGAAT GCGGTGCGCT CGCGCGCGTC CTGCCCGAGG TCGACGCGCT GTGGGGCGTG CCGCAGCGCG CCGACTACCA CCCGGAAGTC GACACGGGCG TGCACGTGAT GATGGTCGTC GACTACGCGG CGAAGCAGGG CTACTCGCTG CCGGTGCGCT TCGCGGCGCT CACGCACGAT CTCGGCAAGG CGACGACGCC CGCCGACGTG CTGCCGCGCC ACGTCGGCCA CGAAGGCCGC AGCGTCGAGC TCATCAAGCC GTTGTGCGAG CGGCTGCGCG TGCCGAACGA TTGCCGCGAT CTGGCGCTGG TGGTCGCGCG CGAGCACGGC AACCTGCATC GCGTGATGGA AATGGGCGCG GCCGCGCTGG TGCGGTTCTT CGAGCGCAGC GATGCGCTGC GCAAGCCGGC GCGCTTCGCG GAGATGCTGC AGGCGTGCGA ATCGGATGCC CGCGGCCGGC TCGGGCTCGA CACGCAGCCG TATCCGCAGG CCGAGCGGCT GCGCGTGGCG CTGGTGGCGG CGCGCAGCGT CGACGCGGGC GCGATCGCGC GGGGTGTCGG CGACGATGTG ATGCAGATCA AGGACGCCGT GCATCGCGCA CGGGTCGAGG CCGTCAAGCA GGCGCTGGCG ATCGGCGAAT AG
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Protein sequence | MNIYAVGGAI RDELLGVPVQ DRDYVVVGAT PEQMVAQGFR PVGKDFPVFL HPDTQEEYAL ARTERKTAAG YHGFQFYFAP DVTLDEDLAR RDLTINAMAR EVSPEGALVG PVIDPFDGQA DLRARVFRHV GDAFVEDPVR ILRIARFAAR FADFTVADDT LALMRRMVDA GEADALVAER VWQEIARGLM EAKPSRMFAV LRECGALARV LPEVDALWGV PQRADYHPEV DTGVHVMMVV DYAAKQGYSL PVRFAALTHD LGKATTPADV LPRHVGHEGR SVELIKPLCE RLRVPNDCRD LALVVAREHG NLHRVMEMGA AALVRFFERS DALRKPARFA EMLQACESDA RGRLGLDTQP YPQAERLRVA LVAARSVDAG AIARGVGDDV MQIKDAVHRA RVEAVKQALA IGE
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