Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2593 |
Symbol | |
ID | 6176161 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 2879804 |
End bp | 2880493 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641682369 |
Product | cytochrome c, class I |
Protein accession | YP_001809286 |
Protein GI | 172061634 |
COG category | [C] Energy production and conversion |
COG ID | [COG2863] Cytochrome c553 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.412189 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCTG CTCAAGCGCA GACCAAGCCC ACGGAGCAAG CGCACGCCCA GCAGGCGCCG CTCAAGGCAC CCGATACGAT GGCCGAGCGT GTGCGCGGCT GTACCGCATG CCACGGCGTT CACGGCCAGG GCACCGACAA CGACTATTTC CCGCGTCTTG CCGGCAAGCC GGCCGAGTAC CTGTACAACC AGCTCGTCAA CTTCCGTGAC GGACGGCGCA AGTACCCGCC GATGAACTAC CTGCTGACGT ACCTGAACGA CGATTACCTG AAAGAGATCG CCGAGCACTT CTCGGCCGAG CGTCCGCCGT ACCCGACGCC CGCCAAGCCG ACGCTGCCGG CCGCCACGCT CGCGCGCGGC AAGCAGCTCG TCACGCAAGG CGATCCGTCG CGCAAGCTGC CGGCCTGCGT GGCCTGCCAC GGCGCCGGGC TGACCGGCAT GCAGCCGGCG ATCCCGGGCC TCGTCGGCCT GCACGCCGAT TACCTGAGCG CACAGCTCGG CGCATGGCGC TCGGGCAACC GCCACGCGAA GGCACCCGAT TGCATGCACG ACATCGCGTC GAAGCTGTCG GATGAAGACG TCACGGCCGT GACCGCGTGG CTCGCCGCGC AACCGGCGCC CGCCAACCCC GTGCCGGCCC CGGCGCGTTC GATGAAGACT CCGCTCGCCT GCGGCAGCGA ACCGCAATAA
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Protein sequence | MSAAQAQTKP TEQAHAQQAP LKAPDTMAER VRGCTACHGV HGQGTDNDYF PRLAGKPAEY LYNQLVNFRD GRRKYPPMNY LLTYLNDDYL KEIAEHFSAE RPPYPTPAKP TLPAATLARG KQLVTQGDPS RKLPACVACH GAGLTGMQPA IPGLVGLHAD YLSAQLGAWR SGNRHAKAPD CMHDIASKLS DEDVTAVTAW LAAQPAPANP VPAPARSMKT PLACGSEPQ
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