Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1522 |
Symbol | |
ID | 6175959 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 1683831 |
End bp | 1684781 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641681283 |
Product | periplasmic binding protein/LacI transcriptional regulator |
Protein accession | YP_001808225 |
Protein GI | 172060573 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.39428 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGACC TCTTTCGCCG TCGTTTCCTG ACCGCCGCGC TTGCCGCCGT CGCGGTCGCC GCCGCACCGG CCGTCCACGC GCAAGCGCCG GCCAAGCCGA AGGTCGCGCT CGTGATGAAG TCGCTCGCGA ACGAGTTCTT CCTGACGATG GAAACCGGCG CGAAGGAATA CCAGAAGCAC AACGCCGGCC AGTTCGACCT GATCACGAAC GGCATCAAGG ACGAGACCGA CACCGCGAAC CAGATCCGCA TCGTCGAGCA GATGATCGTG TCGAAGGTCG ATGCGATCGT GCTCGCGCCG GCTGATTCGA AGGCGCTCGT GCCGGTCGTG AAGAAGGCGG TCGACGCGGG CATCATCGTC GTGAACATCG ACAACCGGCT CGATCCGGAC GTGCTGAAGT CGAAGAACCT GAACGTGCCG TTCGTCGGCC CCGACAACCG CAAGGGCGCG CGCAAGATCG GCGACTACCT TGCGAAGCGG CTGAAGGCGG GCGACCAGGT CGGCATCCTC GAAGGCGTGT CGACGACGAC CAACGCGCAG CAGCGCACGG CCGGCTTCCA GGATGCGATG AAGGCGGGCG GGATGAAGGT CGTGTCGGTG CAGTCGGGCG AATGGGAGAT CGACAAGGGC AATGCGGTCG CATCCGCGAT GCTCAACGAA TACCCGAACC TGCGCGCGCT GCTGTGCGGC AACGATAACA TGGCGATCGG CGCGGTGTCG GCGGTGCGGG CGGCGGGCAA GCAGGGCAAG GTGTTCGTGG TCGGCTACGA CAACATCAAC GCGATCAAGC CGATGCTGAA GGACGGCCGC GTGCTCGCGA CCGCCGACCA GTACGCGGCG AAGCAGGCCG TGTTCGGCAT CGACACGGCG CTCAAGGCGA TTGCCGAGCA TCGCAAGCAG GCCGACATGA CCGGTGTGGT CGAGACGCCG GTGGATCTCG TGACGAAGTA A
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Protein sequence | MNDLFRRRFL TAALAAVAVA AAPAVHAQAP AKPKVALVMK SLANEFFLTM ETGAKEYQKH NAGQFDLITN GIKDETDTAN QIRIVEQMIV SKVDAIVLAP ADSKALVPVV KKAVDAGIIV VNIDNRLDPD VLKSKNLNVP FVGPDNRKGA RKIGDYLAKR LKAGDQVGIL EGVSTTTNAQ QRTAGFQDAM KAGGMKVVSV QSGEWEIDKG NAVASAMLNE YPNLRALLCG NDNMAIGAVS AVRAAGKQGK VFVVGYDNIN AIKPMLKDGR VLATADQYAA KQAVFGIDTA LKAIAEHRKQ ADMTGVVETP VDLVTK
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