Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_I0884 |
Symbol | |
ID | 3847803 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007651 |
Strand | - |
Start bp | 1010304 |
End bp | 1011392 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637840557 |
Product | porin |
Protein accession | YP_441440 |
Protein GI | 83720409 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.273334 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGAAAG TTATGCTCGC GGCGGTACTG GCGACTGCCG GAGTGGCGGC TCACGCTCAA AGCAGCGTGA CGCTGTACGG CCGTCTGGAC GCCGGCATCG AATACATGAA CGGCCTGCCG AGCGCGAACG GCGGCAGCGC GAGCCGCTGG CGCGCGGAAA GCGGCAACTG GGGCACGAGC CTCTGGGGCT TGAAGGGCTC CGAGGACATC GGCGGCGGCA ACAAGATCGT GTTCCAGTTG GAAGGCAGCT TCGACACGAT GAGCGGCAAC GGCCCGGGCG GCGGCAGCCT CTGGAATCGC TGGGCGACGG TCGGTATCTC CAACGACGCA TACGGTACCC TGCTGCTCGG CCGCGAGCTC GCGATCGCGA ACGGCGTGTG GGACTTCGAC CCGTTCGGCC AGTCGTCGTG GTCGACGGCA TCGCTCGTGC GCGGCCGCAA CTGGAACAAG ACCAGCAACA ACATTTCGTA TCAGTCGCCG AAGTTCTACG GCTTCGACGT CTACGGCCAA TACGCGCTGT CGAACGCGAC GAACTGGAAC GGCAACGGCT CGACGAACCA GGGCCGCAGC GCGGGCCTGC AGCTCACCTA CACGACGTCG CTCTTCCAGA TCCGCGGTCT CTATGACGAA GCGCGCGATC CGACCAACGG CAAGCTCGAC GACGTGTTCA ACTACTCGCG CGAATACTTC GCCGGCGTGA ACGTGTTCCT CGGCCAGTTC AAGCTGCAGG CGGCATACCA GGCGTCGCAC GCGGACGGCG GCCCGGCGGT GAACAACGGC ATCACGACGA CGCAGCAAGT CTGGGGCGGC GTCACGTGGC AGGCAACGCC CGCCGCCGCG CTGATCGCGG CCGTCTATCA CGTGAACGCG AACCACGGCG GCGGCAACGC GAACATCTTC ACGGTCGGCG GCTCGTACAA CCTGTCGAAG CGCACGCTGC TCGACGTGCA GGTCGCGACG GTGCGCAACA GCAAGACCGC GAACTTCGGC CTGAACGCGA ACCCGGCCGG CACCGACATC TCGACCGGCA ATCCGAAGTT CGGCGGCAGC CAAACGGGCG TGTACGCCGG CATCCAGCAC CTGTTCTGA
|
Protein sequence | MKKVMLAAVL ATAGVAAHAQ SSVTLYGRLD AGIEYMNGLP SANGGSASRW RAESGNWGTS LWGLKGSEDI GGGNKIVFQL EGSFDTMSGN GPGGGSLWNR WATVGISNDA YGTLLLGREL AIANGVWDFD PFGQSSWSTA SLVRGRNWNK TSNNISYQSP KFYGFDVYGQ YALSNATNWN GNGSTNQGRS AGLQLTYTTS LFQIRGLYDE ARDPTNGKLD DVFNYSREYF AGVNVFLGQF KLQAAYQASH ADGGPAVNNG ITTTQQVWGG VTWQATPAAA LIAAVYHVNA NHGGGNANIF TVGGSYNLSK RTLLDVQVAT VRNSKTANFG LNANPAGTDI STGNPKFGGS QTGVYAGIQH LF
|
| |