Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_5281 |
Symbol | |
ID | 5150774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 5511737 |
End bp | 5513671 |
Gene Length | 1935 bp |
Protein Length | 644 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640560048 |
Product | hypothetical protein |
Protein accession | YP_001241172 |
Protein GI | 148256587 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1835] Predicted acyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.458254 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.151011 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTCGCCG TGGTCGGCTT CCATTTCGAG GCGCCGGCGA TCTTCGGCGG CTTCGTCGGC GTCGACATCT TCTTCGTCAT CTCCGGCTAT CTGATCACGG GAATCATTTC GGCCGAGATC GTAAGCGGCC AATTCTCGTT CGCCCGCTTC TACGAGCGCC GCGCACGGCG GCTGCTGCCC GCCCTCTATG TGATGGTCGC ATGTGCTGCG ATTCCGGCGT CGCACGAGCT GCTCAGCTCC GAACGCGCCG AGTTCTTCGA GTCTGCCGCC GCCGTCGTCA CCTTCACCTC GAACGTCTTC TTCTGGCTGC GGTCCGGCTA TTTCGACCAT GCGGCGGTCG AGAAGCCGCT GCTGCACACC TGGTCGCTCG CGGTCGAGGA GCAGTTCTAT CTGGTGCTTC CGGTCGTCGT CTGGGGGGTG CGGCTGCTGG CGCAGGGGCG CAGGCTGGTG CTGCCTGGGG TCCTGGCGCT GTTCGCCGCG GGGTCGTTTG CGCTCGGCTT GCTCTTGTTG CGTAACGGCG CATTTGCGAG CGCTTTCTTT CTCAGCCCGC CGCGGGCGTG GGAATTCCTG CTCGGCAGCC TGCTGGCCGT GTCGCGCCTT CCTGCGCCAC CGCCAGGCGT GGTGCAGCGC GCGGCGCGCG GGCTGTCGCT CATCCTGATG GCGATCCCGA TTCTGGCGTT GCGTCCCGGG CCAGGCTCTC CCGGCCTCAA CGCACTCGCG CCCTGTCTCG GCGCGGCGCT GTTTCTGTGG AGTGGGACTG GCGTGGCCAA CGTGCCGCGC CACCGGATGT CACCGCTCAA ATGGGCGGCG TTCGTCGGCC GCATCTCTTA CTCGCTGTAT CTCTGGCACT GGCCGCTGTT TGCGTTCGCG CGCTTCGCCA AGCCCGGCCT CGCGCTCGAC GGCTGGGAGC GGGCGGGCCT GTTCGTGCTG ACGGTGGCCG TGGCCACGCT GTCCTGGCGC TATGTCGAGC AGCCGTTCCG GACTCGTCAG CTCGGAGCCA CGCCGCGCGC CGCCTTCAGC CTTGCGGCGC TGGCGAGCCT GCTGCTGCTG GCGGGCAGCG GCGTGGGGCT GCTGGGTAGT GGTGCGGTGT CTGAGGCCGA CCGCGCCGCG CAGCGCTTCG ATGCCTATAA CAGCTACGAC ATGAAGCCGG TCTATCGCTA TGGCGCGTGC TTCACGACGC CGGATGGGCG GGTCGCCGAG GACTGCCTGC GTCCTGTCTC GGGCAAGACC AACATACTGC TGTGGGGCGA CAGCTTCGCT GCGCATTATT TTCACGGCCT CAGAGCTCAC CTTGATCCGA AGACGGTCCA TATCATGCAG GCGAGCCAGC CCACCTGCAT GCCGACCTTC AGCGCCGAGA CTCAGGGCGT CGGCGTGTGC CGGGCGTTCG CGGTTCAGAT GGGCGAATAT TTCGCGCAGG CACGACCTGA CCTGGTCGTG ATGTCGGCGG ATTGGCTCGA GAATGCCCGG CCGCCGCGCT TCGCGGGTAT GGTGCGGGAC CTCCGGCGAA CCATCGGGCG TCTGCGCGAA GCTGGCATTC CGGTGGTTCT GTTCGGTCCT TCCGTGCAGT TCCGGGCGCG GCTGCCATCG ATGCTGGCGC GCGCCACGCT GCGCGGCGTG ACACCGGAGT CCGCGGCGTT CGTCCGCTCG GACATCTTCG CGCTGGACGC GGCGATGCAG GCGGCATTGC CGCCGCGAGA GGGACTATCC TACGTGTCGA TCCTGTCAGC CATCTGCGAG GACCGGCGCT GTCCGCTTAC GGCCAGCAAC GTCCCGCTGT CCTTCGACCA TGCGCATCTG ACGGCCGAGG GCTCGGAGCA TGTGATGGCT GCGGTGGCGC CACGCCTGTT GCCTGACACG ACCGACTTCA GCTCACGTGA GCAGGCCCGC GAGCGCTCCG ATCAGGCAGG TGATAGCGGA ACCCGAGACG ATTGA
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Protein sequence | MLAVVGFHFE APAIFGGFVG VDIFFVISGY LITGIISAEI VSGQFSFARF YERRARRLLP ALYVMVACAA IPASHELLSS ERAEFFESAA AVVTFTSNVF FWLRSGYFDH AAVEKPLLHT WSLAVEEQFY LVLPVVVWGV RLLAQGRRLV LPGVLALFAA GSFALGLLLL RNGAFASAFF LSPPRAWEFL LGSLLAVSRL PAPPPGVVQR AARGLSLILM AIPILALRPG PGSPGLNALA PCLGAALFLW SGTGVANVPR HRMSPLKWAA FVGRISYSLY LWHWPLFAFA RFAKPGLALD GWERAGLFVL TVAVATLSWR YVEQPFRTRQ LGATPRAAFS LAALASLLLL AGSGVGLLGS GAVSEADRAA QRFDAYNSYD MKPVYRYGAC FTTPDGRVAE DCLRPVSGKT NILLWGDSFA AHYFHGLRAH LDPKTVHIMQ ASQPTCMPTF SAETQGVGVC RAFAVQMGEY FAQARPDLVV MSADWLENAR PPRFAGMVRD LRRTIGRLRE AGIPVVLFGP SVQFRARLPS MLARATLRGV TPESAAFVRS DIFALDAAMQ AALPPREGLS YVSILSAICE DRRCPLTASN VPLSFDHAHL TAEGSEHVMA AVAPRLLPDT TDFSSREQAR ERSDQAGDSG TRDD
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