Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0691 |
Symbol | rplC |
ID | 3678837 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 874067 |
End bp | 874702 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637716019 |
Product | 50S ribosomal protein L3 |
Protein accession | YP_321210 |
Protein GI | 75906914 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0087] Ribosomal protein L3 |
TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00208666 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCAGTAG GGATTCTCGG CACCAAGCTG GGCATGACCC AAATATTTGA CGAAGCAGGA GTCGCAATTC CTGTCACAGT CGTACAAGTG GGTCCATGCG TTGTTACCCA AGTTAAAAGT AAACAAACCG ACGGTTACGC TGCCATCCAA GTTGGTTATG GCGAAGTCAA ACCCAAGGCC TTGAATAGAC CCTTACTAGG GCATTTAGCT AAATCATCTG CCCCAGCATT ACGGCATTTG AAAGAGTATC ACACAGATAG CTCTAGCGAT TATGCTTTAG GTCAAGAAAT TAAAGCAGAT ATTTTTAGTG CAGGTGAACT TGTAGACGTA ATCGGTACAA GTATCGGTCG CGGCTTTGCA GGCAACCAAA AGCGGAATAA CTTTGGACGC GGGCCTATGT CTCACGGTTC TAAAAACCAT AGAGCGCCCG GTTCCATCGG TGCAGGTACA ACCCCAGGAC GTGTCTATCC GGGTAAGCGG ATGGCTGGTC GTTTAGGTGG TACTCGCGTC ACCATTCGCA AACTGACCGT AATCCGCGTT GATGCAGAAC GCAACCTACT GCTAATTAAA GGAGCTGTTC CTGGTAAACC AGGTTCCTTA CTAAGTATTG TACCTGCTAA AAAAGTTGGG AAGTAG
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Protein sequence | MSVGILGTKL GMTQIFDEAG VAIPVTVVQV GPCVVTQVKS KQTDGYAAIQ VGYGEVKPKA LNRPLLGHLA KSSAPALRHL KEYHTDSSSD YALGQEIKAD IFSAGELVDV IGTSIGRGFA GNQKRNNFGR GPMSHGSKNH RAPGSIGAGT TPGRVYPGKR MAGRLGGTRV TIRKLTVIRV DAERNLLLIK GAVPGKPGSL LSIVPAKKVG K
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