Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0093 |
Symbol | |
ID | 3683446 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 125194 |
End bp | 125931 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637715420 |
Product | phosphoribosylaminoimidazole-succinocarboxamide synthase |
Protein accession | YP_320614 |
Protein GI | 75906318 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0152] Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase |
TIGRFAM ID | [TIGR00081] phosphoribosylaminoimidazole-succinocarboxamide synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.117725 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGTTC ATTCCAAGCT ATACGAAGGC AAAGCTAAAA TTCTCTATAC TACCGACGAG CCAGAAGTCT TGCTGGCTGA TTTTAAAGAT GATGCCACTG CCTTCAACGC ACAAAAGCGC GGCAGTATCC TTGGCAAAGG AAGAATAAAC TGTAGTATTT CCAGCCAGCT TTTTCAGCAG TTGGAAGCAT CTGGGATCAA GACGCATTTT ATTGATAGCC CTAGCCCCAA CCAAATGCGG GTAAAAGCCG TCAAAATTAT ACCGATAGAA GTAGTAATAC GTAATATCGC TGCTGGTAGT TTATCTCAGC AAACAGGTAT AGAGCTAGGT ACAGTCTTAA AACAGCCCCT AGTAGAGTTT TATTATAAAA ACGATCAGTT AGGAGATCCA CTATTAACAC GCGATCGCCT GCTGTTAATG GAACTAGCCA CGGCGGAACA AGTAGAGGAA ATTACTCATC TAGCATTGCA GATTAACGAT TTCCTCAAAA ACTTCTGGCA GAATTGCGGT ATCACCCTAG TAGACTTCAA ACTAGAATTC GGTTTGGACT CACAACAGCA AATACTCTTA GCTGATGAAA TTAGCCCTGA TACTTGCCGT TTGTGGAATA CAACAGAAGC CGACCCTAAT CGCCGGGTTA TGGATAAAGA CCGTTTCCGG CGCGACTTGG GAAATGTAGA AGATGCTTAT CAGGAGGTTT TACAAAGAGT ACTAACAGCA GTAGAAATTA AAAATTAG
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Protein sequence | MSVHSKLYEG KAKILYTTDE PEVLLADFKD DATAFNAQKR GSILGKGRIN CSISSQLFQQ LEASGIKTHF IDSPSPNQMR VKAVKIIPIE VVIRNIAAGS LSQQTGIELG TVLKQPLVEF YYKNDQLGDP LLTRDRLLLM ELATAEQVEE ITHLALQIND FLKNFWQNCG ITLVDFKLEF GLDSQQQILL ADEISPDTCR LWNTTEADPN RRVMDKDRFR RDLGNVEDAY QEVLQRVLTA VEIKN
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