Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_1181 |
Symbol | |
ID | 8414059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | - |
Start bp | 1321621 |
End bp | 1323102 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 645022775 |
Product | cysteinyl-tRNA synthetase |
Protein accession | YP_003180200 |
Protein GI | 257784983 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0215] Cysteinyl-tRNA synthetase |
TIGRFAM ID | [TIGR00435] cysteinyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00250228 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000333718 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTTGTCT ATAACACTCA GACGCATAAA AAAGAAGAGT TTAAGCCAAT CGATGAAGGC AAAATCCGCA TGTACGTATG CGGTCCTACG GTCTACGACC AGATTCATAT CGGAAATGCC CGTACGTTCC TCTCGTTTGA CGTTATTCGA CGTTATCTGA TGTATAAAGG TTTTGAGGTT ACGTTTGCTC AGAATCTGAC CGATGTTGAT GACAAGATTA TTCAGCGCGC CAACGAGCAG GGAAGGACTG CTCAAGAGGT CTCTGAAGAG TTTTCTCAGG CGTTTATCAA GCAGATGCAT CGCTTCAATA TACTGGATCC AGATATTCGT CCTCGCGCAA CGCATGAGAT TGAAGCCATG CTCCAGATGA TTCAATCTTT GATTGAGCAG GGTTACGCTT ACGCGGTGCC TTCGGGCGAC GTGTATTTCT CGGTTCGTTC TGACCACGAC TATGGTGTGC TTTCTGGCCG CGATCTTGAT CAGCTTCGCG CAGGTGAGCG TGTTGAGGTT AATGACGAGA AACGCGATCC ATTTGACTTT GCACTCTGGA AGGCTGCTAA GCCTGGTGAG CCTAGCTGGT CAAGCCCATG GGGAGAAGGT CGTCCAGGTT GGCACAGTGA GTGCTGTGCG ATGATTCATC GCTATTTAGG CACTCCAATT GATATTCATG GTGGTGGCTC TGACCTGGTA TTCCCTCACC ATGAGAACGA GACCGCACAG GCATCTTGCG CCTGGCATGC TCCTCTCGCT AATTATTGGA TGCACACCGG AATGCTGCGT GTTGACGGTG AGAAGATGTC TAAGTCTTTG GGTAACTTCT ATACGCTTAA GGAAGTTTTG GACAAGTATC CTGCAGATGC AGTACGACTT TTGATGCTTC AAACGCACTA TCGCGCGCCA CTTGATTTCT CGTTTGAACG CCTTGAAGGA ACCGTTGGCA CACTCGAGCG CATGAAGACC TGCGTTGCAA ATCTTCGTTG GGCCTACAAG CAGTCTTCTG CTCAGCACGA GCTTTCTGAC GCTGATCGTA CGCTTGCTGA GGCAATTAAC ATAGCCCAGA GCGAGTTTGA CGCTCAGATG GATGATGATT TCAATACCGC AGGAGCGCTT GCTGCCATCT TTGCGCTGGT AACTGCTGCA AATACCTATC TTGCAGAGGT TGGGCAGAAC GTTGGCGCAA GCCCTGTTCT CCGTGCATCA GATATGTTGT GCGAGCTCAC AGGAGCCTTG GGAATTGATT TGACCCAGGC GGCGTCTACT TCTGATTTAC CAGAAGAGCT TGTAGCACTT GCCGCCCAGG TAGCAGCCTA TGAAGGCTCT TCAGCTGACG AGGCCGCAGA GGTTTTGCTT GCTGCTCGTC AGGAAGCTCG TTCCCAGAAG AACTGGGCAG TTGCCGATCA AATTAGAGAC GGCATTGCCG AGCTTGGACT TTTGATTGAA GATACCGCCG CTGGCGCTCG ACTTAAGCGT AAGGCAGACT AA
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Protein sequence | MLVYNTQTHK KEEFKPIDEG KIRMYVCGPT VYDQIHIGNA RTFLSFDVIR RYLMYKGFEV TFAQNLTDVD DKIIQRANEQ GRTAQEVSEE FSQAFIKQMH RFNILDPDIR PRATHEIEAM LQMIQSLIEQ GYAYAVPSGD VYFSVRSDHD YGVLSGRDLD QLRAGERVEV NDEKRDPFDF ALWKAAKPGE PSWSSPWGEG RPGWHSECCA MIHRYLGTPI DIHGGGSDLV FPHHENETAQ ASCAWHAPLA NYWMHTGMLR VDGEKMSKSL GNFYTLKEVL DKYPADAVRL LMLQTHYRAP LDFSFERLEG TVGTLERMKT CVANLRWAYK QSSAQHELSD ADRTLAEAIN IAQSEFDAQM DDDFNTAGAL AAIFALVTAA NTYLAEVGQN VGASPVLRAS DMLCELTGAL GIDLTQAAST SDLPEELVAL AAQVAAYEGS SADEAAEVLL AARQEARSQK NWAVADQIRD GIAELGLLIE DTAAGARLKR KAD
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