Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A9601_01601 |
Symbol | crtB |
ID | 4716844 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. AS9601 |
Kingdom | Bacteria |
Replicon accession | NC_008816 |
Strand | - |
Start bp | 149303 |
End bp | 150211 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640077859 |
Product | squalene and phytoene synthase |
Protein accession | YP_001008555 |
Protein GI | 123967697 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1562] Phytoene/squalene synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.37181 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAAATT CAATTTCTCA ACTAGATCAA GCATACGAGA TATGCCGAAA AGAAACCCAA AAATGGGCTA AAACCTTTTA CTTGGGAACG CTTCTGCTAC CTGTAGAGAA AAGAAAAGCC ATTTGGGCTA TTTATGTTTG GTGTAGAAGA ACAGATGAAA TAATGGATAG CTTAGAAGCT TCAACTAAAT CGCAAGATGA ACTAGCAGAA AATTTAAACG AATGGGAAGA AAATACAAAG AATGTTTTTA AAGGCAACAT TAAATCCGAA TTAGATGCCG TTCTACTAGA CACCATCGAA AAATATCCAC AAAGTATTCA ACCTTATCTA GACATGATAG ATGGCCAGAG AATGGATCTT AATAAATTTA GATACAAAGA TTTTGATGAA TTAAAACTCT ATTGTTATAG AGTCGCAGGG ACAGTTGGTT TGATGACTCA GAATGTCATG GGAATTGATA GTGCGTACAC ATCCGCTCCA TGGAGTGCCA AACCTGACCC CTCAGAAGCC GCTATAGCTC TAGGTATAGC TAATCAATTA ACGAATATAT TGAGAGATGT CGGCGAAGAT AGGCAAAGAG GTAGAATTTA TCTTCCTCAA GAGGATATTG AAAAATTTAA TTATTCTGAA GAAAAACTTT TAAAAGGTGA AATAAACAAA CAATGGAAAG CACTAATGAA CTTTCAATTA AATAGAGCTC GCGATTGGTT CCAGAAATCT GAAGATGGAA TCAAATGGTT ATCTTCTGAC GCAAGATGGC CTGTTTGGAC ATCCTTACGA CTTTACAGAG GAATATTAGA TTCTATAGAA AGGCTAGACT ATGATGTCTT TAATAATAGA GCTTATGTAA AAAATTCAGT AAAAGCTTTT GAAATTCCTA TATCTTTTTT AATTTCTCGA ATTAGATGA
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Protein sequence | MKNSISQLDQ AYEICRKETQ KWAKTFYLGT LLLPVEKRKA IWAIYVWCRR TDEIMDSLEA STKSQDELAE NLNEWEENTK NVFKGNIKSE LDAVLLDTIE KYPQSIQPYL DMIDGQRMDL NKFRYKDFDE LKLYCYRVAG TVGLMTQNVM GIDSAYTSAP WSAKPDPSEA AIALGIANQL TNILRDVGED RQRGRIYLPQ EDIEKFNYSE EKLLKGEINK QWKALMNFQL NRARDWFQKS EDGIKWLSSD ARWPVWTSLR LYRGILDSIE RLDYDVFNNR AYVKNSVKAF EIPISFLISR IR
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